Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 494 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  281 bits (720), Expect = 3e-80
 Identities = 181/485 (37%), Positives = 260/485 (53%), Gaps = 31/485 (6%)

Query: 22  ELTLDSRAIRRGDVFLALPGHK------VDGRQFIDKALAQGATAVLVHTDKIDE----- 70
           E+  DSR + RGDVF+A+PG        VDG  FI KA A GA AV+    +++      
Sbjct: 19  EIRTDSRKVGRGDVFVAVPGVAANGGAGVDGADFIVKAWAAGAGAVVCLPARVEAALADA 78

Query: 71  -QGKVIATEQGVQIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTSQLCAQL 129
            +G V+A     ++    L +      A+ +PVV         +TGTNGKT+ + L   +
Sbjct: 79  PEGAVVAAHDDPRVAIGLLGQARYGTDALPFPVV--------AVTGTNGKTTITYLLDHV 130

Query: 130 VTLLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCAMEVSSHGLV 189
            + L  +A V+GT+     G  +D+  TT D I     L    D GV+   MEVSSH L 
Sbjct: 131 FSALGRRAGVLGTVSYRWPGFAMDAPLTTPDCIETHAMLGRMRDAGVDVALMEVSSHALD 190

Query: 190 QGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRF--DSLLHGLVNLDDPVGAA 247
           Q RV  + F  A+ TNLT+DHLDYHGDME+Y  AK  LF    D+     VN DD  G  
Sbjct: 191 QRRVAGIRFAGAILTNLTQDHLDYHGDMEHYYAAKARLFTELPDADKACAVNADDAWGRR 250

Query: 248 WLSELANVPAKMWGFSIEAHTEVA----FYTKNAQFNDQGVQATLVWPEGEVDIRSPLLG 303
            L E+ +      GF ++A   V+     + +  +    G+   + +   + ++ S L+G
Sbjct: 251 LLGEVPHAI----GFGLDAGNAVSGRRFLHGEMVRNATSGLTLRMTYEGRQWELSSHLVG 306

Query: 304 AFNLSNLLAALSALYLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYAHTPDAI 363
           A N SNLLA  +     G+  +  AS   +   V GR+ER      + + VDYAHTPDA+
Sbjct: 307 AHNASNLLAVQAVCLGMGLAPQDFASLAGF-TGVPGRLERIVNPRGLDIFVDYAHTPDAL 365

Query: 364 EQALNALRRHCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDPNQII 423
           E  L ALR      +  VFGCGG+RD+ KRPLMGQA  + AD  ++TSDN R EDP  I+
Sbjct: 366 ENVLRALRAVGFSRIVTVFGCGGNRDRTKRPLMGQAVARHADVAVLTSDNPRHEDPEAIM 425

Query: 424 TDIIQGLTHPERALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRHDYDERA 483
            D++ GL    + +++ DR  AI   +A  +PGDV+L+AGKGHE+YQ+    +  Y ++ 
Sbjct: 426 ADVLPGLAGARKVVSDADRARAIGKALALLQPGDVLLVAGKGHESYQQIGDRKVPYSDQQ 485

Query: 484 LARQL 488
           + R++
Sbjct: 486 VIREI 490