Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 485 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Marinobacter adhaerens HP15

 Score =  345 bits (885), Expect = 2e-99
 Identities = 196/476 (41%), Positives = 265/476 (55%), Gaps = 6/476 (1%)

Query: 13  PYAGEQTFLELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTDKIDEQG 72
           P   + T   L  DSR +  GD F+AL G +     ++DKA+A GAT +L+   +  E  
Sbjct: 8   PSVFDVTIHGLKTDSREVASGDAFIALSGARTPADFYVDKAIAAGATVILLEAQQAGE-- 65

Query: 73  KVIATEQGVQIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTSQLCAQLVTL 132
                  G  I      R +    A R+     Q + ++G+TGTNGKTS  Q  AQL+  
Sbjct: 66  --CTEHHGALIVPVAGLRSLVGRIADRFFEHPSQRLRLIGVTGTNGKTSVCQYVAQLLKE 123

Query: 133 LEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCAMEVSSHGLVQGR 192
                 ++GTLG G+ G L  + +TT DA+ + R L     +      MEVSSH L QGR
Sbjct: 124 TGTPCGILGTLGYGMPGALQPATHTTPDAVQVNRVLSRIVKQEGRAAVMEVSSHALDQGR 183

Query: 193 VDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVNLDDPVGAAWLSEL 252
           VD +    AVFTNLTRDHLDYHG ME Y  AK  LF+ + L   ++N DDP G     +L
Sbjct: 184 VDNLSMTGAVFTNLTRDHLDYHGSMEAYGAAKAQLFQREELHFSVINFDDPFGRQLFEQL 243

Query: 253 ANVPAKMWGFSIEAHTEVAFYTKNAQFNDQGVQATLVWPEGEVDIRSPLLGAFNLSNLLA 312
                ++     EA TE+  + +  +  D+G +A +    G   +  PL+G+FN SN+LA
Sbjct: 244 DGKCDRVRYSLHEAQTEL--WLREFRPTDEGFEAEVDGEWGRFVVSVPLMGSFNASNVLA 301

Query: 313 ALSALYLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYAHTPDAIEQALNALRR 372
           A++ +   G+ +  +   V  L P  GR+ERF  A+ + +VVDYAHTPDA+  AL ALR 
Sbjct: 302 AMATVLTLGVPIERVQQAVGRLTPPPGRLERFVGANGVRVVVDYAHTPDALANALTALRP 361

Query: 373 HCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDPNQIITDIIQGLTH 432
           H  GEL CVFGCGGDRD GKRP M + AE+ ADR++VT DN RSEDP  I   I+ G T 
Sbjct: 362 HVTGELVCVFGCGGDRDAGKRPEMAREAERLADRVVVTDDNPRSEDPETIAEHILAGFTD 421

Query: 433 PERALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRHDYDERALARQL 488
             R     DR  AI+  +  A P DV+L+AGKGHE YQE AG ++ + +    R +
Sbjct: 422 AARVSVIHDRAEAIRSTIRSATPNDVVLIAGKGHEAYQEIAGQKYPFSDAEQVRHV 477