Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 495 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Pantoea sp. MT58

 Score =  439 bits (1128), Expect = e-127
 Identities = 232/486 (47%), Positives = 310/486 (63%), Gaps = 2/486 (0%)

Query: 4   LRDLLAPWFPYAGEQTFLELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLV 63
           LRDLL PW P A  +   ++TLDSR    GD+F+A+ GH+VDGR+FI +A+AQG  AV+ 
Sbjct: 6   LRDLLGPWVPGAPARPLRDMTLDSRIAASGDLFVAVAGHQVDGRRFIPQAIAQGVAAVVA 65

Query: 64  HTDKIDEQGKVIATEQGVQIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTS 123
             +     G++        IY  QL +++SA+A  R+    G+   ++G+TGTNGKT+T+
Sbjct: 66  EAEGEAADGEIREMHGVPVIYLAQLPQRLSALAG-RFYQQPGEKQTLIGVTGTNGKTTTT 124

Query: 124 QLCAQLVTLLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCAMEV 183
           QL AQ  TLL   +AVMGT+GNGL G L  + NTT  A+ +   L++ A+KG +  AMEV
Sbjct: 125 QLLAQWATLLGETSAVMGTVGNGLVGHLSAAENTTGSAVDVQHLLNDLAEKGASLTAMEV 184

Query: 184 SSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVNLDDP 243
           SSHGLVQ RV A+PF  AVFTNL+RDHLDYHGDM++Y  AK +LF    +   ++N DD 
Sbjct: 185 SSHGLVQHRVAALPFAAAVFTNLSRDHLDYHGDMQSYESAKWLLFSEHQVGQAILNADDE 244

Query: 244 VGAAWLSELANVPAKMWGFSIEAHTEVAFYTKNA-QFNDQGVQATLVWPEGEVDIRSPLL 302
           VG  WL+ L +  A     +++      +   +A +++D G         G  +I SPL+
Sbjct: 245 VGRRWLARLPDAVAVTMENNLQPGCHGRWLKADAVEYHDNGAHIRFSSSWGNGEINSPLM 304

Query: 303 GAFNLSNLLAALSALYLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYAHTPDA 362
           GAFN+SNL+ AL+ L      +  L +  P L PV GRME F+ A   T+VVDYAHTPDA
Sbjct: 305 GAFNVSNLMLALATLLSLDYPLATLINVAPQLQPVNGRMEVFSAAGKPTVVVDYAHTPDA 364

Query: 363 IEQALNALRRHCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDPNQI 422
           +E+AL A R HC G+LWC+FGCGGDRDKGKRPLMG  AEQ AD +++T DN RSEDP  I
Sbjct: 365 LEKALEAARLHCKGKLWCLFGCGGDRDKGKRPLMGAIAEQYADVVVITDDNPRSEDPQAI 424

Query: 423 ITDIIQGLTHPERALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRHDYDER 482
           + DI+ GL  P RA     R  A+ + + QA+P D++L+AGKGHE YQ     R DY +R
Sbjct: 425 VNDILTGLLDPGRARLVSGRAQAVTNTIMQAQPDDIVLVAGKGHEDYQIIGNRRLDYSDR 484

Query: 483 ALARQL 488
           A    L
Sbjct: 485 ATVAAL 490