Pairwise Alignments

Query, 488 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 481 a.a., UDP-N-acetylmuramate--alanine ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  388 bits (997), Expect = e-112
 Identities = 214/462 (46%), Positives = 290/462 (62%), Gaps = 17/462 (3%)

Query: 23  IHFVGIGGAGMGGIAEVLVNEGYVVSGSDIAQNAVTDRLCLLGAKIHIGHGADNVQQADV 82
           +HFVGIGG GM GIAEVL N GY V GSD++ NA   RL  LG  I IGH A N+  A V
Sbjct: 11  LHFVGIGGIGMSGIAEVLHNLGYRVQGSDLSDNANVKRLRDLGIPIAIGHKAANLGDAQV 70

Query: 83  VVVSTAINPENPEIIAAKELRIPIVRRAEMLAELMRYRHGVAIAGTHGKTTTTSLIASLY 142
           VV+S+A+   NPE++ A+   +P+VRRAEML ELMR +  +A+AGTHGKTTTTSL+A L 
Sbjct: 71  VVISSAVKASNPEVMDARARFLPVVRRAEMLGELMRLKWSIAVAGTHGKTTTTSLVAQLL 130

Query: 143 GQAGRDPTFVIGGLLNSAGTNARLGTSRYLIAEADESDASFLHLQPMVSVVTNIEADHMD 202
             AG DPT + GG+LN+ GTNA LGT  +++ EADESD +F  L   +S+VTNI+ +H+D
Sbjct: 131 DAAGLDPTVINGGILNARGTNAYLGTGEWMVVEADESDGTFTKLPATISLVTNIDPEHLD 190

Query: 203 TYGGDFEKLKSTFVDFLHNLPFYGVAVVCIDDAVVREIMPRI-GRHMITYGFSDDADVQA 261
            Y G F+K++  F  F+HNLPFYG A +CID   V+ ++P++  R +ITYG S  AD++ 
Sbjct: 191 FY-GTFDKVREAFRAFIHNLPFYGFACMCIDHPEVQAMIPQLQDRKIITYGLSPQADIRG 249

Query: 262 LNFHQQGHQCRFTV----RRKGKEDLDLLLNLP--GQHNVLNALAAIAVATEDEIDDSAI 315
            N        RF V    R  G       + LP  G+HNVLNAL AI +A E  IDD+ I
Sbjct: 250 ANVTLGPRGARFDVILTDRAGGGSRTIEGIRLPMYGRHNVLNALGAIGIAAEMGIDDAVI 309

Query: 316 IQALAEFQGIGRRFQHLGKFATPKGEVMLVDDYGHHPSEVAATIKAARAGWPDKRLVMAY 375
              L  F+G+ RRF   G      G V ++DDYGHHP E+AA +KAAR    ++ ++   
Sbjct: 310 RDGLYHFEGVKRRFTRTG----DAGGVTVIDDYGHHPVEIAAVLKAARDA-TEREVIAVV 364

Query: 376 QPHRYTRTRDLYEDFIEVLSQVDCLLLLEVYSAGEAPIPGADGRALCRSIRLRGQLDPIF 435
           QPHRY+R   L+EDF    +  D +++ +VY+AGE PIPGA   AL   +++ G      
Sbjct: 365 QPHRYSRLNSLFEDFCTCFNDADQVVVADVYAAGEQPIPGASKEALAEGLKVHGHKSVHV 424

Query: 436 IASPDQLAEVLPDVLQEGDLLLTQGAGNI----GALSRQLAA 473
           + +   L E++  + + GDL++  GAG+I     AL +QL A
Sbjct: 425 LTNEQALPELIARIAKPGDLVVCLGAGSISTWANALPKQLEA 466