Pairwise Alignments

Query, 488 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 467 a.a., UDP-N-acetylmuramate--L-alanine ligase from Rhodopseudomonas palustris CGA009

 Score =  391 bits (1005), Expect = e-113
 Identities = 215/454 (47%), Positives = 294/454 (64%), Gaps = 13/454 (2%)

Query: 18  RRIKRIHFVGIGGAGMGGIAEVLVNEGYVVSGSDIAQNAVTDRLCLLGAKIHIGHGADNV 77
           R I  IHFVGIGG GM GIAEVL N GY V GSD +++A  +RL   G +IH+GH ADN+
Sbjct: 5   RHIGPIHFVGIGGIGMSGIAEVLCNLGYTVQGSDASESANVNRLREKGIQIHVGHQADNI 64

Query: 78  QQADVVVVSTAINPENPEIIAAKELRIPIVRRAEMLAELMRYRHGVAIAGTHGKTTTTSL 137
           + ADV+VVSTAI  +NPE++AA+  RIP+VRRAEMLAELMR +  VAIAGTHGKTTTTS+
Sbjct: 65  KGADVLVVSTAIKRDNPELLAARAQRIPVVRRAEMLAELMRLKSCVAIAGTHGKTTTTSM 124

Query: 138 IASLYGQAGRDPTFVIGGLLNSAGTNARLGTSRYLIAEADESDASFLHLQPMVSVVTNIE 197
           +A+L      DPT + GG++N+ GTNARLG   +++ EADESD +FL L   V++VTN++
Sbjct: 125 VAALLDAGDLDPTVINGGIINAYGTNARLGGGDWMVVEADESDGTFLKLPADVAIVTNVD 184

Query: 198 ADHMDTYGGDFEKLKSTFVDFLHNLPFYGVAVVCIDDAVVREIMPRI-GRHMITYGFSDD 256
            +H+D +   F+ ++  F +F+ N+PFYG AV+CID  VV+ ++ +I  R +ITYG +  
Sbjct: 185 PEHLDHF-KTFDAVQDAFRNFVENVPFYGFAVMCIDHPVVQTLVGKIEDRRIITYGENPQ 243

Query: 257 ADVQALNFHQQGHQCRFTV----RRKG--KEDLDLLLNLPGQHNVLNALAAIAVATEDEI 310
           AD + L+    G    F V    R+ G   E  DL L +PG+HN LNA AAIAVA E  +
Sbjct: 244 ADARLLDLAASGGGSTFKVAFRDRKAGTAHEIADLKLPMPGRHNALNATAAIAVAHELGL 303

Query: 311 DDSAIIQALAEFQGIGRRFQHLGKFATPKGEVMLVDDYGHHPSEVAATIKAARAGWPDKR 370
            D  I +ALA F G+ RRF   G++      V ++DDYGHHP E+AA +KAAR     K 
Sbjct: 304 SDDTIRKALAAFGGVRRRFTKTGEW----NGVTIIDDYGHHPVEIAAVLKAARQSTAGK- 358

Query: 371 LVMAYQPHRYTRTRDLYEDFIEVLSQVDCLLLLEVYSAGEAPIPGADGRALCRSIRLRGQ 430
           ++   QPHR++R + L+E+F    +  D +++ +VY AGEAPI G D       +R  G 
Sbjct: 359 VIAVVQPHRFSRLQSLFEEFCTCFNDADAVIVADVYPAGEAPIEGIDRDHFVLGLRAHGH 418

Query: 431 LDPIFIASPDQLAEVLPDVLQEGDLLLTQGAGNI 464
            D + +     LA V+  +   GD ++  GAGNI
Sbjct: 419 RDVVALQDSASLAGVVAGLAHSGDYVVCLGAGNI 452