Pairwise Alignments

Query, 488 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 455 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  444 bits (1142), Expect = e-129
 Identities = 234/446 (52%), Positives = 308/446 (69%), Gaps = 6/446 (1%)

Query: 19  RIKRIHFVGIGGAGMGGIAEVLVNEGYVVSGSDIAQNAVTDRLCLLGAKIHIGHGADNVQ 78
           +IK+IH VGIGG+GM GIAEVL+N GY V GSD++   V  RL  LGA+I+IGHG  N+ 
Sbjct: 5   KIKKIHMVGIGGSGMSGIAEVLLNLGYEVCGSDMSDGTVVRRLRKLGAEIYIGHGEGNLT 64

Query: 79  QADVVVVSTAINPENPEIIAAKELRIPIVRRAEMLAELMRYRHGVAIAGTHGKTTTTSLI 138
            A V+V STAI  ENPE+ AA++  IPI+ RAEMLAELMR R G+AIAGTHGKTTTTSL 
Sbjct: 65  DAQVLVKSTAIGDENPEVAAARKRGIPIIPRAEMLAELMRLRTGIAIAGTHGKTTTTSLT 124

Query: 139 ASLYGQAGRDPTFVIGGLLNSAGTNARLGTSRYLIAEADESDASFLHLQPMVSVVTNIEA 198
           A+++ +AG DPT +IGG LN+ G NARLG   YLIAEADESD SFL L P+V+VVTN++ 
Sbjct: 125 AAIFDEAGTDPTVIIGGRLNAYGANARLGDGAYLIAEADESDGSFLCLFPIVTVVTNVDM 184

Query: 199 DHMDTYGGDFEKLKSTFVDFLHNLPFYGVAVVCIDDAVVREIMPRIGRHMITYGFSDDAD 258
           DHMD Y    + +   FVDF++ +PFYG+ VVC DD  VR ++PR+ R ++TYGF +   
Sbjct: 185 DHMDHYPSQ-QAIDDAFVDFMNKVPFYGMNVVCGDDPGVRRLLPRVKRPVVTYGFGEGNA 243

Query: 259 VQALNFHQQGHQCRFTVRRKGKEDLDLLLNLPGQHNVLNALAAIAVATEDEIDDSAIIQA 318
           ++A           F V   G +   + L  PG+HN+LNALAAI VA E +I    I+  
Sbjct: 244 IRA-EVLACADSSLFNVIVNGDDIGQVRLAQPGRHNILNALAAIGVALECDIAPEKIVAG 302

Query: 319 LAEFQGIGRRFQHLGKFATPKGEVMLVDDYGHHPSEVAATIKAARAGWPDKRLVMAYQPH 378
           LA+F G+GRRF+  G+    +  V++VDDYGHHP+E+AAT+  AR  +P +RLV+ +QPH
Sbjct: 303 LAKFGGVGRRFERKGE----RDGVLVVDDYGHHPAEIAATLATARQCFPHRRLVVVFQPH 358

Query: 379 RYTRTRDLYEDFIEVLSQVDCLLLLEVYSAGEAPIPGADGRALCRSIRLRGQLDPIFIAS 438
           R++RT+ L+ +F +V   VD LLL E+Y A E PIPG  G++L + IR   + D  +   
Sbjct: 359 RFSRTQALFGEFCKVFDGVDKLLLTEIYPASEKPIPGVSGQSLAQGIRQVSKTDVTYHQD 418

Query: 439 PDQLAEVLPDVLQEGDLLLTQGAGNI 464
            D +   LP+VLQ GDLLLT GAGN+
Sbjct: 419 FDSVLAALPEVLQPGDLLLTLGAGNV 444