Pairwise Alignments

Query, 488 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Shewanella sp. ANA-3

Subject, 470 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  373 bits (958), Expect = e-108
 Identities = 197/454 (43%), Positives = 288/454 (63%), Gaps = 9/454 (1%)

Query: 23  IHFVGIGGAGMGGIAEVLVNEGYVVSGSDIAQNAVTDRLCLLGAKIHIGHGADNVQQADV 82
           IHF GIGG GM GIAEVL+  GY V GSD+  + +T+RL  LGAKI IG   +N+  A+V
Sbjct: 20  IHFTGIGGIGMSGIAEVLLTHGYTVQGSDLKPSKITERLERLGAKIFIGQVGENLADAEV 79

Query: 83  VVVSTAINPENPEIIAAKELRIPIVRRAEMLAELMRYRHGVAIAGTHGKTTTTSLIASLY 142
           VV+S+AI P NPE+  A+   +P+VRRAEMLAELMR +  +AIAGTHGKTTTT+++A+L 
Sbjct: 80  VVISSAIKPGNPELETARARGLPVVRRAEMLAELMRLKSNIAIAGTHGKTTTTTMVATLL 139

Query: 143 GQAGRDPTFVIGGLLNSAGTNARLGTSRYLIAEADESDASFLHLQPMVSVVTNIEADHMD 202
            + G DPT + GG++++  +NAR G   +++ EADESD +F  L   ++VVTNI+ +HM+
Sbjct: 140 DRGGIDPTVINGGIIHAYDSNARAGAGEWMVVEADESDGTFNRLPATIAVVTNIDPEHME 199

Query: 203 TYGGDFEKLKSTFVDFLHNLPFYGVAVVCIDDAVVREIMPRI-GRHMITYGFSDDADVQA 261
            + G FE+LK  F +F+ N+PFYG+AV C D   V+ ++ RI  R ++T+GF+  ADV+A
Sbjct: 200 -HWGSFERLKDGFHEFVSNIPFYGLAVCCTDHPEVQALVGRITDRRVVTFGFNTQADVRA 258

Query: 262 LNFHQQGHQCRFTV--RRKGKEDLDLLLNLPGQHNVLNALAAIAVATEDEIDDSAIIQAL 319
           +N   +     F +  R +G+      L +PG HNV NALAA+AVA    +    I  AL
Sbjct: 259 VNLTYKSGVAHFDILLRNEGQVISGCTLPMPGDHNVSNALAAVAVARHLGMKRDEIRAAL 318

Query: 320 AEFQGIGRRFQHLGKFATPKGEVMLVDDYGHHPSEVAATIKAARAGWPDKRLVMAYQPHR 379
           A F G+ RRF  + +     G V ++DDYGHHP E+AA +KAAR    + R++  +QPHR
Sbjct: 319 AGFAGVNRRFTKVAEL----GGVTIIDDYGHHPVEIAAVLKAARQA-SEGRVIAVHQPHR 373

Query: 380 YTRTRDLYEDFIEVLSQVDCLLLLEVYSAGEAPIPGADGRALCRSIRLRGQLDPIFIASP 439
           ++R   L+EDF    ++ D + + ++++AGE PIPGA    L + +   G    + +   
Sbjct: 374 FSRLASLFEDFCTCFNEADVVGISDIFAAGEDPIPGASRDDLVKGLIAHGHRHAVAVPDE 433

Query: 440 DQLAEVLPDVLQEGDLLLTQGAGNIGALSRQLAA 473
           D L  ++    + GD+++  GAG I   +  L A
Sbjct: 434 DALEALIRAEAKPGDIVVCLGAGTISTWAHNLPA 467