Pairwise Alignments

Query, 625 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

Subject, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  152 bits (384), Expect = 2e-41
 Identities = 84/205 (40%), Positives = 123/205 (60%), Gaps = 8/205 (3%)

Query: 420 ETNERLEQMVQERTLELEITLRELHEVNQKLTEQSTIDSLTGVKNRSAFDKRLLAESRIS 479
           E N  LE ++Q RT EL        E N +L + S  D LT + NR  FD+ L  E    
Sbjct: 146 ERNRELESIIQARTYELA-------EANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRG 198

Query: 480 RRQETPIALLMLDIDRFKSINDQFGHLAGDQALKVIATTLQQHLKRPTDLVSRFGGEEFA 539
           +R  TP++L+MLDID FK  ND +GHLAGD  LK++A  L Q  +R  +LV+R+GGEEF 
Sbjct: 199 QRNNTPLSLIMLDIDHFKLFNDHYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFV 258

Query: 540 IILPNTTAEGAIQVAESIRDAVTSIGLAWEGKPIPL-TVSIGVSADVISNDQHSTELLEQ 598
           I+LPNT  + A+  A+ +   + S+ +      + + TVS+GV+  + S+  ++ EL+ Q
Sbjct: 259 ILLPNTDLQTALDTAKHVHQLIQSLAIPHIKTNLGIVTVSVGVACLLPSDKHNALELVHQ 318

Query: 599 ADKALYQAKNSGRNQVKLYAPAQTE 623
           AD ALY AK++GRN ++   P  T+
Sbjct: 319 ADTALYLAKSAGRNCIRSAPPNGTQ 343