Pairwise Alignments

Query, 625 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

Subject, 630 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  135 bits (340), Expect = 5e-36
 Identities = 78/196 (39%), Positives = 117/196 (59%), Gaps = 5/196 (2%)

Query: 433 TLELEITLRELHEVNQKLT---EQSTIDSLTGVKNRSAFDKRLLAESRISRRQETPIALL 489
           TL L +    L +   + T   +++ ID LTG+ NR+ FD+ LLAE +  +RQ++P++L+
Sbjct: 285 TLGLSLYRHLLAQAGARATMWEQRAGIDPLTGLCNRARFDEVLLAELQRLQRQDSPLSLM 344

Query: 490 MLDIDRFKSINDQFGHLAGDQALKVIATTLQQHLKRPTDLVSRFGGEEFAIILPNTTAEG 549
           M D D FK  ND +GH+AGD  LK +A  L+    R +D+V+R+GGEEF  ILP T  + 
Sbjct: 345 MFDADHFKPYNDMYGHVAGDACLKRVAGVLRAVAHRASDVVARYGGEEFVCILPGTDRDS 404

Query: 550 AIQVAESIRDAVTSIGLAWEGKPIP--LTVSIGVSADVISNDQHSTELLEQADKALYQAK 607
           A  +AE +R  V ++ +   G P+   LTVS GV      +     E++ Q D+ALYQAK
Sbjct: 405 AYALAEKVRQGVRALAIPHVGSPVAGVLTVSAGVVTVHGCDGLDPQEVVAQVDRALYQAK 464

Query: 608 NSGRNQVKLYAPAQTE 623
            +GR++V +   A  E
Sbjct: 465 GAGRDRVMVAKGAAKE 480