Pairwise Alignments

Query, 383 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 369 a.a., ABC transporter permease from Rhodanobacter denitrificans FW104-10B01

 Score = 70.9 bits (172), Expect = 6e-17
 Identities = 93/389 (23%), Positives = 172/389 (44%), Gaps = 45/389 (11%)

Query: 3   LWQLVLTELKAIVSDKAIAVTLFGGVLFYSVLYPLPYLHQVPTEQQLI---VVDLDHSSL 59
           LW +V+ EL+ +  D+     + G  +   VL+     + + T  + +   +VD  +S+ 
Sbjct: 6   LWAIVVKELRQLRRDRITLAMIVGIPVIQLVLFG----YAINTNLRGLDAGIVDQANSAG 61

Query: 60  SRQLIRHADASAKIQVIGQVGSITEAKRFIETGKAHGLLVIPEGFRRDLLLGKGVTLSYG 119
           SR L+    A+  +  + +  +  E    I  G+    +V+P  F R  + G+       
Sbjct: 62  SRALVLDMLATGVVAPVARADTPQELMAMIRRGRISIGIVLPADFERRRIDGR------- 114

Query: 120 GDASYFLIYSAVAEGLVSAGMDA--GKQVQLIGMLAQGKNPKEAEQNLNSL----HLNSV 173
                     AVA+ LV     A  G   QL+ +      P +    L S      ++ V
Sbjct: 115 ----------AVAQILVDGSDTAVQGAAAQLMQVPIDSAAP-DTRAPLTSTPVDGRISVV 163

Query: 174 PAFNPSLGYTPYVVPGLFLLILHQTLLIGTGILGAGQWRSRSYWQQV--SPL---QLVCG 228
             +NP       +VPGL  +IL  T+++ T I    + R R   + +  +PL   +L+ G
Sbjct: 164 GFYNPQRRSAVNIVPGLIGVILTMTMVLFTAIAVVRE-RERGNMELLIATPLTSAELMVG 222

Query: 229 RILAFMLIYMVFTSFYVGYCYHWYKVSIQASLGLVALWLLPFLLATAAAGVAMSTLFSRR 288
           ++L ++ I +V TS  +      ++V I+ S+  V L     +LA  A G+ +ST    +
Sbjct: 223 KVLPYVAIGLVQTSVILALGTWLFEVPIRGSVLDVYLASGLLILANLALGLLISTRAQSQ 282

Query: 289 DLPTQVLLLISMPILFVSGFVWPIALIPEPLVLGSQIIPA---VPAIMG-MLELNQMGAS 344
               Q+   + +P + +SGF++P A +P+ +   ++++P    +  I G ML    +G  
Sbjct: 283 FQAMQMTFFVFLPSILLSGFMFPFAGMPKLVQWLAEVLPLTHFLRLIRGVMLRGAGLGEM 342

Query: 345 WASVLPKWLQLWGLFVLFLGLAILGIKRR 373
           W  V    L L    ++ + LAI   ++R
Sbjct: 343 WGDV----LALAAFVLVMMALAIRRFRKR 367