Pairwise Alignments

Query, 383 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 373 a.a., ABC transporter, permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 89/387 (22%), Positives = 166/387 (42%), Gaps = 32/387 (8%)

Query: 3   LWQLVLTELKAIVSDKAIAVTLFGGVLFYSVLYPLPYLHQVPTEQQLI---VVDLDHSSL 59
           +W +V+ EL+ +  D+      FG ++   ++  + + + + T+ + +   +V+L  SS 
Sbjct: 5   IWAVVVKELRQLSRDRMT----FGMIVMIPLVQLMLFGYAINTDARHLPAGLVNLSDSSY 60

Query: 60  SRQLIRHADASAKIQVIGQVGSITEAKRFIETGKAHGLLVIPEGFRRDLLLGKGVTLSYG 119
           SR L++  +A+  +       S  +A+  I  G+   +L +       L+       ++ 
Sbjct: 61  SRALVKAVEATQVVDFKRSYSSAAQAEAAITRGEVKAVLYLGADLDERLVRHP----AFA 116

Query: 120 GDASYFLIYSAVAEGLVSAGMDAGKQVQLIGMLAQGKNPKEAEQNL--NSLHLNSVPAFN 177
           G A YF     V + LV  G D       I  L Q    +   + L  N      V  FN
Sbjct: 117 GQA-YFA--EPVGQWLVD-GSDT-VVASTIRSLRQMPLDEITGRTLKSNPPSFEVVQYFN 171

Query: 178 PSLGYTPYVVPGLFLLILHQTLLIGTGILGAGQWRSRSYWQQ-------VSPLQLVCGRI 230
           P       +VPGL  +IL  T+++ T    A   R R            V PL+L+ G+I
Sbjct: 172 PEQRSVVNIVPGLLGVILTMTMVMFTS---AAIVREREQGNMEFLITTPVRPLELMLGKI 228

Query: 231 LAFMLIYMVFTSFYVGYCYHWYKVSIQASLGLVALWLLPFLLATAAAGVAMSTLFSRRDL 290
             ++L+  V  +  +   +  + V I+  +  +A   + F+ A+   G+ +ST+   +  
Sbjct: 229 TPYVLVGFVQVTIILSAGHLLFDVPIRGGIDSIAFAAMLFICASLTLGLVISTIAKTQLQ 288

Query: 291 PTQVLLLISMPILFVSGFVWPIALIPEPLVLGSQIIPAVPAIMGMLELNQMGASWASVLP 350
             Q+ + I +P + +SGF++P   +P   V    I  A+PA   M     +    A V  
Sbjct: 289 SMQMTVFILLPSILLSGFMFPYEAMP---VAAQWIAEALPATHFMRMSRAIVLRDAEVSD 345

Query: 351 -KWLQLWGLFVLFLGLAILGIKRRARV 376
            ++  LW +    LGL +  ++   R+
Sbjct: 346 LQFDALWMIGFTCLGLLVASLRFSKRL 372