Pairwise Alignments

Query, 443 a.a., amino acid permease-associated region (RefSeq) from Shewanella sp. ANA-3

Subject, 470 a.a., amino acid transporter from Xanthomonas campestris pv. campestris strain 8004

 Score =  104 bits (259), Expect = 7e-27
 Identities = 118/466 (25%), Positives = 202/466 (43%), Gaps = 55/466 (11%)

Query: 8   LKQSLSLWQVVVMGLAYLTPMAVFDTFGIVSEITSGHVATSYLLALAGILFTAFSYGHLV 67
           L +SLS   ++ +G+  +    ++   G+ ++     V  S++ A       A +Y  + 
Sbjct: 22  LVRSLSWPHLIALGIGAIVGTGIYTLIGVGADKAGPAVLLSFVAAGIVCACAALAYAEMA 81

Query: 68  RKYPYAGSAYTYAQKTFSPNVGFMVGWSSLLDYMFMPMINMLLAKIYLTAMFPNVEPWI- 126
              P AGSAYTY+      ++ ++VGWS +L+Y  +    +    +  +  F     W+ 
Sbjct: 82  TMMPAAGSAYTYSYTALGESIAWVVGWSLVLEYSLV----VSTVAVGWSGYFVGFLQWLG 137

Query: 127 --------------FIFGLVAVMTVLNLRGIDLV-----ANFNGVIVFAQIAIILVFIGL 167
                          I  L AV+    + G+ +      A  N V+V  +I  + VF+ +
Sbjct: 138 VNLPHALIAGPHAGGIVNLPAVVITFLVAGMLMAGTKESATLNAVLVVLKIIALGVFVAI 197

Query: 168 MAHSLSLGEGEGVIASVRPFYSEEISLAPLFTG-------ATILCFSFLGFDGLSSLSEE 220
              + +        A+++PF     S A    G       A I+ F+F GFD +S+ +EE
Sbjct: 198 ALPAFN-------SANLQPFMPYGFSKAMGPDGVERGVMAAAIIFFAFYGFDAISTAAEE 250

Query: 221 TKDAKRVIPRAIVLTALIGGVIFVSVSYFLQLFFPDISRFQQLDAVLPEIALYVGGNLFQ 280
           TK+  R +   IV  ++IG  +   +     +     + F +    L  I   +G     
Sbjct: 251 TKNPGRDLSIGIV-GSMIGCTLIYVLVALSAVGAMSFTVFGKSPEPLALILRELGHGKAA 309

Query: 281 SVVLVATTIAVLASGMAAHAGVARILYVMGRDNMLPNKGFGYIHPKWRTPA----FNVIL 336
            V+     IA+    +A   G +RI +VM RD +LP +G   ++ +  TP     F  +L
Sbjct: 310 LVIGAVAIIALPTVLLAFLYGQSRIFFVMSRDGLLP-RGLSKVNARTGTPVAITLFTAVL 368

Query: 337 VGLLALSAVSFDLEMALALVNFGALVAFTFVNLSVIVQFYIKEKRNQSLKDHFQYFVLPL 396
           V  LA  A    L+   AL N G L AFT V   ++V    +  R ++ +    + V P+
Sbjct: 369 VAALAGVA---RLDEIAALANAGTLAAFTAVAACLLVLRVREPTRARAFRTPLAWVVGPV 425

Query: 397 CGAATIGVLWINLEPQSLELG--LIWAAVG-ILYLAL--RSLRLRK 437
              A +G L++     S   G  L+W A+G ++YLA   R+ RL K
Sbjct: 426 ---AILGCLYLFWSLPSTTQGWFLVWNALGVVVYLAYGRRNSRLGK 468