Pairwise Alignments

Query, 443 a.a., amino acid permease-associated region (RefSeq) from Shewanella sp. ANA-3

Subject, 459 a.a., Amino acid transporter from Xanthomonas campestris pv. campestris strain 8004

 Score =  212 bits (540), Expect = 2e-59
 Identities = 133/430 (30%), Positives = 224/430 (52%), Gaps = 17/430 (3%)

Query: 8   LKQSLSLWQVVVMGLAYLTPMAVFDTFGIVSEITSGHVATSYLLALAGILFTAFSYGHLV 67
           LK+ LSL  +++ GL ++ P A F  FG V +I++G V  +YL+    +LFTA SY  + 
Sbjct: 22  LKRQLSLKDLLIYGLVFMVPTAPFSIFGGVFDISAGMVPLTYLVGFVAMLFTALSYQQMS 81

Query: 68  RKYPYAGSAYTYAQKTFSPNVGFMVGWSSLLDYMFMPMINMLLAKIYLTAMFPNVEPWIF 127
           + +P AGS Y Y  +  S  +GF+ GW+ LLDY+ +P +  ++    +  + P V    +
Sbjct: 82  QAFPVAGSVYAYVGRGLSGGMGFLAGWAILLDYLLVPTLLYVVGANAMHNVLPQVPQPAW 141

Query: 128 IFGLVAVMTVLNLRGIDLVANFNGVIVFAQIAIILVFIGLMAHSLSLGEGEGVIASVRPF 187
           I   V + TV+NLRGI+  A  N   ++AQ+ ++ +F+ L   ++  G   G   ++RPF
Sbjct: 142 IAFFVVLNTVVNLRGIETTARANRFFLYAQLIVLALFVVLATLAIQRGV-NGAQWTLRPF 200

Query: 188 YS-EEISLAPLFTGATILCFSFLGFDGLSSLSEETKDAKRVIPRAIVLTALIGGVIFVSV 246
           Y+ +  S   +F+  ++   SFLGFD +S+LSEET+   RV+ RA +L  ++   +FV  
Sbjct: 201 YNPQAFSPQLIFSALSVAVVSFLGFDAISTLSEETRGGNRVVGRATLLALVLVAGLFVLQ 260

Query: 247 SYFLQLFFPDISRFQQLDA---VLPEIALYVGGNLFQSVVLVATTI-AVLASGMAAHAGV 302
           ++   L  P + R+    A      EI   + G   Q V+ +   I A +A+ + A A  
Sbjct: 261 TWLAALLQPHLQRYPSAQASNDAFFEIGRLIAGPWMQIVIALTVAISAAIANSLVAQAAT 320

Query: 303 ARILYVMGRDNMLPNKGFGYIHPKWRTPAFNVILVGLLAL---SAVSFDLEMALALVNFG 359
           +R+L+ M RD  LP     YIHP+   P   ++LV  L++         + +  +L N G
Sbjct: 321 SRLLFAMARDRQLP-AFLRYIHPRTGVPQRAILLVAALSMVLGEVFVGQIALLSSLCNVG 379

Query: 360 ALVAFTFVNLSVIVQFYIKEKRNQSLKDHFQYFVLPLCGAATIGVLWINLEPQSLELGLI 419
           AL AF  ++++V+  F    ++         + V+P+ G   +  + IN +  +   G  
Sbjct: 380 ALTAFVLLHVAVLWHFRAHGRK-------VLHGVVPVIGIVILAYVLINADLHAQLGGSA 432

Query: 420 WAAVGILYLA 429
           W  VG+  LA
Sbjct: 433 WMVVGLAVLA 442