Pairwise Alignments

Query, 443 a.a., amino acid permease-associated region (RefSeq) from Shewanella sp. ANA-3

Subject, 531 a.a., amino acid permease from Caulobacter crescentus NA1000

 Score =  114 bits (285), Expect = 7e-30
 Identities = 109/429 (25%), Positives = 188/429 (43%), Gaps = 77/429 (17%)

Query: 8   LKQSLSLWQVVVMGLAYLTPMAVFDTFGIVSEITSGH-VATSYLLALAGILFTAFSYGHL 66
           LK++L    ++ +G+  +    +F   G V+   +G  +  S+++A          Y  L
Sbjct: 24  LKRTLGPINLMSLGVGAIIGAGIFVLTGQVASANAGPAIMLSFIVAGIACALAGLCYAEL 83

Query: 67  VRKYPYAGSAYTYAQKTFSPNVGFMVGWSSLLDY-----------------------MFM 103
               P +GSAYTYA  T      +++GW  +L+Y                       +  
Sbjct: 84  ASTMPVSGSAYTYAYGTLGEVFAWIMGWLLVLEYGVAASTVAVGWSGYVVSTLHALGINF 143

Query: 104 PMINMLLAKIYLTA--------------MFPNVEPWIFIFGL-VAVMTVLNLRGIDLVAN 148
           PMI +  A   + A              MF        +  + +A+++ L + G+   AN
Sbjct: 144 PMIQVAGADAPMWATPLIQAVAAPGGGTMFAMTGTLNLVAAIGIAMVSALLVVGVSESAN 203

Query: 149 FNGVIVFAQIAIILVFIGLMAHSLSLGEGEGVIASVRPFYSE------EISLAPLFTGAT 202
            N  IV  ++ +++ FI + A  ++        A+  PF  E      E  +  +F GA 
Sbjct: 204 VNNAIVVIKVIVLVTFIAVGAQYINP-------ANWHPFIPEPTGQPGEFGIGGIFRGAA 256

Query: 203 ILCFSFLGFDGLSSLSEETKDAKRVIPRAIVLTALIGGVIFVSVSYFLQLFFPDISRFQQ 262
           I+ F+++GF+ +S+ + E K+  R +P  I+   +I  +I+++V+  +    P    F++
Sbjct: 257 IIFFAYVGFEAVSTAAAEAKNPSRDVPIGILGALIICTLIYMAVAAVMTGVVP----FRE 312

Query: 263 LDAVLPEIALYV----------------GG--NLFQSVVLVATTIAVLASGMAAHAGVAR 304
           L +  P IA+ +                GG  NL    + +     + +  +    G  R
Sbjct: 313 LASPAP-IAVAIDRMGLEWADIPYAAAEGGKLNLLSFAIKIGAITGLSSVMLVLCYGQTR 371

Query: 305 ILYVMGRDNMLPNKGFGYIHPKWRTPAFNVILVGLLALSAVSF-DLEMALALVNFGALVA 363
           I Y M RD +LP K F  IHPK+RTP    IL+G++   A SF  + +   LV+ G  VA
Sbjct: 372 IFYTMARDGLLP-KVFAEIHPKFRTPWLGTILLGVVIAIAASFLPISLLGDLVSLGTAVA 430

Query: 364 FTFVNLSVI 372
           F+ V LSVI
Sbjct: 431 FSIVCLSVI 439