Pairwise Alignments

Query, 302 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

Subject, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  136 bits (342), Expect = 7e-37
 Identities = 94/309 (30%), Positives = 156/309 (50%), Gaps = 24/309 (7%)

Query: 5   EQMALVLDALPDPAFILSQSGRYVAVFGGKDARYYHDGSGLVGLYLSDVLNDEKTTYYLG 64
           E +  +  +LP+P F++++ G Y+  +GG D+  +H+ S LVGL   DVL   +  ++  
Sbjct: 14  EILQFIFQSLPEPTFLINKKGVYIEAWGGTDSERHHNPSYLVGLNQYDVLPAAQAAWFTD 73

Query: 65  IIQQALDSRKLLIEEYELSNKDVKGLPD-EGPSQPIWFEGRIQALDFLVNNEPVVLWVAS 123
           +IQQA++       EYE+    +    +  GPSQ  +F     AL   + N  ++LW   
Sbjct: 74  VIQQAIEQGCAKELEYEIDPTQLPCFDNVPGPSQKQYFS----ALVIPLPNTDMMLWTVR 129

Query: 124 NISK-RHKLE------LQLRQLSDTDQLTGLYNRRRLDRDLQLLFDTFSRHRIPASILVL 176
           NIS  +H +E      L+L  L+  D LT +YNR  +D  L    D     R+ +++L++
Sbjct: 130 NISDYKHTVEKLAQHQLELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSALLMI 189

Query: 177 DLDHLKRINDQLGHQAGDRVIMAVADTCQQQFRKTDSAYRFGGDEFVIALPGVDHDQAIV 236
           D+D  K  ND  GH  GD V+  V+ T +Q     D  +R+GGDEF+I +  VD  Q   
Sbjct: 190 DIDCFKEYNDGYGHIQGDDVLRKVSQTLRQWKSNLDLCFRYGGDEFLIFMTRVDAKQCQQ 249

Query: 237 FAEYLCDCCFKALQQLSVKGL------FATVSIGVASIEAGDK--SYEDTLKRADAALYQ 288
            AE L       + +L++  L        T+++G+   +  +K  + E  +  AD AL+ 
Sbjct: 250 RAEKL----MAMIHELNIPHLSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFH 305

Query: 289 AKRDGKNRV 297
           AK + +  +
Sbjct: 306 AKHEQRGTI 314