Pairwise Alignments

Query, 568 a.a., amidase (RefSeq) from Shewanella sp. ANA-3

Subject, 490 a.a., amidase from Rhodopseudomonas palustris CGA009

 Score =  124 bits (310), Expect = 1e-32
 Identities = 92/255 (36%), Positives = 137/255 (53%), Gaps = 21/255 (8%)

Query: 8   SIAELREALESGRRTAVELVKSYLARVAAYDGPATETKLNALVVHNPD-ALKEAEASDAR 66
           ++ +L  AL++ + +AVEL +  + R+  +D      K+NA+ V + D AL+ A A+D  
Sbjct: 10  TVTDLSAALKAKQVSAVELTQDAIGRIERHDD-----KVNAVCVRDFDRALQSARAADLA 64

Query: 67  RARGETLSPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQYDAFAVERLRAAGAICLGK 126
            +RG    PL GIP T K+S+ V GL    G    K+ VA  DA AVER++AAG + LGK
Sbjct: 65  LSRGGR-EPLLGIPMTVKESFNVAGLPTTWGFVEQKNFVAAADALAVERVKAAGGVILGK 123

Query: 127 TNMPPMANGGMQRGH--YGRAESPYNANYLTAPFASGSSNGAGTGTAASYSAFGLAEETW 184
           TN+ P+A G  Q  +  YG   +PY+          GSS G+    AA + A  L  +  
Sbjct: 124 TNV-PVALGDWQSYNEIYGTTGNPYDLGRT----PGGSSGGSSAALAAGFGALSLGSDIG 178

Query: 185 SSGRGPASNNGLCAYTPSRGVISVRGN----WPLTPT---MDVVVPYTRTMADMLEVLDV 237
            S R PA   G+ A+ P+ G+   RG+    +P  P+   + V+ P  R+ AD+  +LDV
Sbjct: 179 GSLRVPAHYCGVYAHKPTFGLCPARGHTPPPFPPLPSNRDLSVIGPMARSAADLALLLDV 238

Query: 238 IVADDPITRGDLWRL 252
           I   DPI  G  ++L
Sbjct: 239 IAGTDPIFDGIAYQL 253



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 511 GVPTVTVPMGVMADIGMPVGLTFAGRAYDDNNLLKFAGAFE 551
           G+P+  +P+  M+D G+P+G+   G   +D   LK A   E
Sbjct: 437 GLPSTALPIA-MSDDGLPIGVQIVGPWLEDRTPLKLAELIE 476