Pairwise Alignments

Query, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

Subject, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  380 bits (976), Expect = e-109
 Identities = 306/997 (30%), Positives = 488/997 (48%), Gaps = 63/997 (6%)

Query: 702  ELCHQHIDRALAQQETFEVEYRIRHRDGSIRWVHEKGKASYTEEGFPLWF--DGSIDDIT 759
            EL  + ++RA A+QE   V      R+ SI  + E       + G P     D S++ ++
Sbjct: 74   ELSSEDLNRAYARQEQELVA-----REQSIASLRETANRLLGQMGLPALSPEDASLESLS 128

Query: 760  ESKLAMV-ELEASRLQLTNITESIPCTVYQLRW---VSPAD-HTFTFLSGAAF-HMLGLH 813
            +    +V E E+SR++L     S+    + L     VS  D   F   +   F  + G  
Sbjct: 129  QLMDTLVRERESSRIRLHQAHSSLEQQKFALDQHAIVSVTDVEGFIIEANDRFCEISGYS 188

Query: 814  REDLL-KDFNIIAERIFDEERPEVVRALAGKSEDKLQWVREFRYRHPNGSIRWMEAGASG 872
            RE+L+ ++  ++   I     P   + +         W  E   R  +G + W+ A    
Sbjct: 189  REELVGRNHRVVKSGIHP---PAFYQEMWDTIVHGRVWQGEVCNRSKDGRLYWVSATVVP 245

Query: 873  HYNDDGAII-WNGYVMDITERKAIEEELAVSEAHF-KALFDGSTIGIVNVDAKGVILDCN 930
             ++D G    +     DIT RK  E  L   + HF + + D   + +   D +G     N
Sbjct: 246  FFDDLGVPYQYIAIRTDITARKLAEARLD-EQLHFSRQVLDTLPVPLYFKDTQGRYQGFN 304

Query: 931  DQYCEDMGQTRESLCGVPIFDVLSLQDKETAKAQFREL-AEGKVDHYRGERSFIRPNGEP 989
              + +  G       G  + D+L  +  E   A+  E+ A G    Y  E   I P G  
Sbjct: 305  KAFADFFGIEPSLWIGRHVRDLLPPELAEQHVARDEEVFARGGRQSY--EIELITPAGAR 362

Query: 990  LWMTVNVSALFDSQKQFESAVVSMVDMTELKLLSDELLVAKEEADAASKAKGDFLANMSH 1049
                 N +AL          V +++D++E K    E+L AKE A+ A++AK DFLANMSH
Sbjct: 363  YDTLYNKAALTRPDGSVRGLVGTIMDISERKRWEAEILRAKEAAENANRAKSDFLANMSH 422

Query: 1050 EIRTPMNAIIGMSQLCLQTALDKKQKNYVEKIERASKSLLSIINDILDFSKIEAGKLDIE 1109
            EIRTPMN +IGM++L L T L ++Q++Y+E ++ ++ +LLSII+DILDFSKIEAG+LD+E
Sbjct: 423  EIRTPMNGVIGMTELALDTELTEEQRDYLEAVQMSANALLSIIDDILDFSKIEAGRLDVE 482

Query: 1110 SVPFQLDTMLEDLSDMFSEKAAHKQLELLFAVAPNVPRHLFGDSLRLGQVLINLMNNAIK 1169
             +PF L+ +  D     + +A  K LELL    P VPR L GD  RL Q+L+NL+ NAIK
Sbjct: 483  LIPFDLEKVCADALRTVAVRADQKGLELLARRGPGVPRRLLGDPGRLRQILLNLLGNAIK 542

Query: 1170 FTERGEVLLSLNLVEQQNDDVVLRFSVRDSGIGLTADQQAKLFKSFSQADTSTTRKYGGT 1229
            FTERGE+ +++ L E      VL F V D+GIG+  ++Q  +F++F+Q D+STTR++GGT
Sbjct: 543  FTERGEIEVAVELAEPGAAGQVLYFCVSDTGIGIAPEKQEHIFEAFAQEDSSTTRRFGGT 602

Query: 1230 GLGLAICKQLVELMGGTIGVESQFGHGSTFYFTVKLQISSGQKLTVAQELEGMP-ILVAD 1288
            GLGL IC +L ELMGG I V+S  G GS F+FT++L           + L G P +L+  
Sbjct: 603  GLGLTICSRLCELMGGRIWVDSVPGQGSAFHFTLQLPTDGAAAPEPERRLSGKPALLLVV 662

Query: 1289 DNATARDIMRTTLESMGFRVDTVRSGEEAVTRCIQQEYAVALIDWKMPNLDGIETAKQIK 1348
             NA  R  ++  L S G  V    SG E +    Q ++   + D +  + D  +  + + 
Sbjct: 663  ANARQRCRLQGLLASWGATVVAAASGAEGLALLEQGQWDGVVADSRPVDGDAGDLLEHLA 722

Query: 1349 QQAKKAPRILMVSAHANQDFLSQIEELGLAGYISKPISASRLLDGIINSLGRAGVLPVRR 1408
            +   + P ++++S    +  +++ + LG+  Y+ KP  A  L   +   L  A    V  
Sbjct: 723  RSPGRVPLLMLLSPSRMRQEIARCKALGVGHYLGKPALADELWRSLQALLEPA----VAG 778

Query: 1409 QSESIDPKLLLPLKGKRILLVEDNEMNLEVATEFLEQVGIILSIATNGQIALDKLEQQSF 1468
               ++      P  G  +LL ED+ +N ++    LE++G  +++A +G  A+    ++ F
Sbjct: 779  VPATVAEAAGTPPAGLEVLLAEDHPVNQQLMRNMLERMGHRVTLARHGGEAVAAAARRRF 838

Query: 1469 DLVLMDCQMPVMDGYQATQALRKRPE---LTELPVVAMTANAMAGDKEMCLRAGMNDHIA 1525
            DLVLMD QMP M G QAT+ +R   +   L  L + A++A A   D++  L AGM+ ++ 
Sbjct: 839  DLVLMDMQMPEMGGEQATRLIRADEQARGLAPLRIYALSAAARREDRQRGLVAGMDGYLL 898

Query: 1526 KPIEVNLLYQTLLKYLGGSASLVDNTEPSQLVDIPVKPINLDSESVVKWPEHPELDIDRG 1585
            KP++     + L + L G A                             P   E   D G
Sbjct: 899  KPLQ----QKDLQEVLAGLAR----------------------------PGQEEGGFDYG 926

Query: 1586 LQLVQNSTRLYQRSFDRFVTSQRNVVDLINKALANDKRDDAVRMAHTLKGLAGNLSSSKL 1645
              L      + Q   D F    R  +  + +ALA    +   R+AH+L+G A N   S L
Sbjct: 927  RMLEGADRDVLQIIGDVFPGLARLEMAAMEEALAAADWERLGRVAHSLRGAAANFGPSPL 986

Query: 1646 VELARQLELHLSEKSEYQTELDQIQALVASICDAIER 1682
            V+ A ++E     ++     L +++  + ++   +++
Sbjct: 987  VQQATEVERLAPHQAVQPAHLAELRLALEALLQGLQQ 1023



 Score = 34.3 bits (77), Expect = 8e-05
 Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 8/106 (7%)

Query: 484 MLPLVSDTGELMSVEMLFTDVTEQFSAAT-------WSNAVLEAAPEAMLIVEQMGSIVF 536
           ++P   D G       + TD+T +  A         +S  VL+  P  +   +  G    
Sbjct: 243 VVPFFDDLGVPYQYIAIRTDITARKLAEARLDEQLHFSRQVLDTLPVPLYFKDTQGRYQG 302

Query: 537 TNTRCQILFGYDANSMLGLQVESLLPEAMRSNH-ARDRLQFLREGR 581
            N      FG + +  +G  V  LLP  +   H ARD   F R GR
Sbjct: 303 FNKAFADFFGIEPSLWIGRHVRDLLPPELAEQHVARDEEVFARGGR 348