Pairwise Alignments

Query, 206 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella sp. ANA-3

Subject, 232 a.a., NqrDE/RnfAE family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  124 bits (311), Expect = 1e-33
 Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 8/198 (4%)

Query: 15  VFANNPVAMQVLGVCSALAVSNSMQTAVVMTLAVTFVLVFSNLIISAIRNFIPNSVRIIA 74
           ++ NNP  +Q LG+C  LAV+ ++  A+ + +A   VL+ SN++IS +R+++P  +RI  
Sbjct: 12  LWKNNPGLVQRLGLCPLLAVTTTLTNALGLGIATMLVLIGSNVLISLVRDYVPKEIRIPV 71

Query: 75  QMTVIASLVIIVDMVLQDVAYELSKQLSVFVGLIITNCIIMGRAEAFAMKYPPHLAVVDA 134
            + +IA+LV  V +++   AY L   L +F+ LI+TNCII+GRAEAFA +     +  D 
Sbjct: 72  FVMIIAALVTAVQLLVNAYAYGLYMSLGIFLPLIVTNCIIIGRAEAFASRNNAFSSAFDG 131

Query: 135 VGNAAGYGLVLISVAFVRELLGTGNLF-GHSVL-----TTVENGGWYLPNE--MFKLPPS 186
           +    G+ LVL+ +   RE+LG G LF G   L       +    W +     +  LPP 
Sbjct: 132 LMMGLGFTLVLVLLGATREILGQGTLFDGADQLLGPWAKALTFQVWQVDTSFLLAMLPPG 191

Query: 187 AFFLIGLLIWTINVIQRK 204
           AF ++GLLI   NVI +K
Sbjct: 192 AFIVMGLLIALKNVIDKK 209