Pairwise Alignments

Query, 200 a.a., ECF subfamily RNA polymerase sigma-24 factor (RefSeq) from Shewanella sp. ANA-3

Subject, 199 a.a., RNA polymerase sigma factor RpoE from Cupriavidus basilensis FW507-4G11

 Score = 65.9 bits (159), Expect = 5e-16
 Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 5/184 (2%)

Query: 10  AHEHTDEQLMQRYAKGDGKAFEQLYLKHKGALYRYFVRQLGDKQLAEDLYQETWGRVIRA 69
           +    D+ L++R  +GD +AFE L +K+   + R   R + D    ED+ Q+ + +  RA
Sbjct: 2   SEREADQLLVERVQQGDKRAFELLVVKYHRKIIRLISRLVRDSAEVEDVAQDAFIKAYRA 61

Query: 70  AANYEPSAKFNTWLYRIAHNLLIDHVRAVKPVDLVSHD-NEEGLDTFVGAEQ----EQPD 124
              +   + F TWLYRIA N   +++         S D + E  +TF   EQ      P+
Sbjct: 62  LPQFRGESAFYTWLYRIAVNTAKNYLATQGRRPEASSDIDAEEAETFADGEQLRDINTPE 121

Query: 125 VHWQETQKSLLLKTCIALLPQVQKEAFILNIEMGFTAAVISDIAGVTLEATKSRIRYAYQ 184
                 Q +  +   +  LP+  + A  L    G +   I++  G  +   +SRI  A +
Sbjct: 122 SMLHTRQVAETVNRAMEALPEELRTAITLREIEGLSYEEIAEAMGCPIGTVRSRIFRARE 181

Query: 185 SLKD 188
           ++ D
Sbjct: 182 AIAD 185