Pairwise Alignments

Query, 200 a.a., ECF subfamily RNA polymerase sigma-24 factor (RefSeq) from Shewanella sp. ANA-3

Subject, 199 a.a., RNA polymerase, sigma-24 subunit, RpoE from Paraburkholderia bryophila 376MFSha3.1

 Score = 65.1 bits (157), Expect = 8e-16
 Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 5/182 (2%)

Query: 10  AHEHTDEQLMQRYAKGDGKAFEQLYLKHKGALYRYFVRQLGDKQLAEDLYQETWGRVIRA 69
           + +  D+ L++R  KGD  AFE L  K+   + R   R + D    ED+ Q+ + +  RA
Sbjct: 2   SEKEIDQVLVERVQKGDKAAFELLVSKYHRKILRLISRLVRDPAEVEDVAQDAFIKAYRA 61

Query: 70  AANYEPSAKFNTWLYRIAHNLLIDHVRAV-KPVDLVSHDNEEGLDTFVGAEQ----EQPD 124
              +   + F TWLYRIA N   +++    +     +  + E  +TF  A+Q      P+
Sbjct: 62  LPQFRGESAFYTWLYRIAVNTAKNYLATQGRRAPTSTEADAEEAETFSDADQLRDINTPE 121

Query: 125 VHWQETQKSLLLKTCIALLPQVQKEAFILNIEMGFTAAVISDIAGVTLEATKSRIRYAYQ 184
                 Q +  +   +A+LP+  + A  L    G +   I+++ G  +   +SRI  A +
Sbjct: 122 SMLMSKQIAETVNAAMAVLPEELRTAITLREIEGLSYEEIAEMMGCPIGTVRSRIFRARE 181

Query: 185 SL 186
           ++
Sbjct: 182 AI 183