Pairwise Alignments

Query, 200 a.a., ECF subfamily RNA polymerase sigma-24 factor (RefSeq) from Shewanella sp. ANA-3

Subject, 186 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Paraburkholderia bryophila 376MFSha3.1

 Score = 68.2 bits (165), Expect = 9e-17
 Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 8/174 (4%)

Query: 15  DEQLMQRYAKGDGKAFEQLYLKHKGALYRYFVRQLGDKQLAEDLYQETWGRVIRAAANY- 73
           D +L+++  + D  A   L  +    L     R LGD+  AED+ QE + R+ + A  + 
Sbjct: 7   DAELLEQVGRHDPAAVRTLVARKLPRLLAVATRMLGDRMEAEDVAQEVFVRIWKQATRWR 66

Query: 74  EPSAKFNTWLYRIAHNLLIDHVRAVKPVDLVSHDNEEGLDTFVGAEQEQPDVHWQETQKS 133
           E  AKF+TW++R+A NL  D +R  +       D  + L   V      PD   +   + 
Sbjct: 67  EGEAKFDTWIHRVALNLCYDRLRGRR------EDPGDDLPDEVD-PAPPPDARLEARARG 119

Query: 134 LLLKTCIALLPQVQKEAFILNIEMGFTAAVISDIAGVTLEATKSRIRYAYQSLK 187
             ++  +A LP  Q+EA +L      +    + + GVT++A +S +  A ++L+
Sbjct: 120 ERVREALAALPARQREALVLTYYQEMSNTDAAALMGVTVDALESLLARARRNLR 173