Pairwise Alignments

Query, 432 a.a., N-acetylglucosamine transporter nagP (from data) from Shewanella sp. ANA-3

Subject, 438 a.a., glucose/galactose transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  317 bits (811), Expect = 6e-91
 Identities = 171/444 (38%), Positives = 273/444 (61%), Gaps = 31/444 (6%)

Query: 6   SQQKSSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTFTA 65
           +++K+ ++ +AI+A +FFI GF +W+N  L+PY +   +L  F++  + F+FYIA    A
Sbjct: 8   ARKKTYYISLAILAGMFFIFGFVSWVNSILIPYFRISCELTHFESYFVAFAFYIAYFVMA 67

Query: 66  LPSAWVIRKVGYKNGMALGMGIMMLAGLLFIPAAKTQIFGLFLCAQLVMGTGQTLLQTAV 125
           +PS  +++KVG+K G+  G  +  L   +F+PAA  + F +FL     +GTG  +LQTA 
Sbjct: 68  IPSGILLKKVGFKKGIMYGFMLTALGAFIFVPAALARQFEIFLIGLFSIGTGLAILQTAA 127

Query: 126 NPYVVRLGPEESAAARVSVMGILNKGAGVIAPLVFSALILDSFKDRIGTTLTQVQIDE-- 183
           NPYV  +GP +SAA R+S+MGI NK AG+I+PL+F+ALIL +    +   +    +DE  
Sbjct: 128 NPYVTIIGPIDSAARRISIMGICNKVAGIISPLIFAALILKANDSELFALIESGALDEAT 187

Query: 184 ---MANSL----VFPYLGMAIFIGVLALAVKKSPLPELSNEDEVA------EHTDKGQIK 230
              M N L    + PY+ + I + +  + ++ S LPE++ +++ A      +HTDK   K
Sbjct: 188 KNAMLNELIQRVIIPYIILGIILLLTGIGIRYSVLPEINTDEQNATDEQDNKHTDK---K 244

Query: 231 AALSHPNLAFGVIALFVYVAVEVIAGDTIGTFALSLGVE--HYGVMTSYTMVCMVLGYTL 288
           + L  P L  G +A+F +V  +VIA DTI  +A S+G++     V  SYT+ C ++GY L
Sbjct: 245 SILDFPYLILGALAIFFHVGTQVIAIDTIINYANSMGMDLLEAKVFPSYTLGCTMIGYIL 304

Query: 289 GIILIPRFISQPTALMISAILGLLLTLAILFGDNNSYAIANALLVPFGGVALPDTLLFIA 348
           GIILIP++ISQ  AL+   +LGL L+  +++ D +        +  FG  A   ++ F+ 
Sbjct: 305 GIILIPKYISQKNALIGCTLLGLALSFGVVWADFD--------MTLFGHQA-NASIFFLN 355

Query: 349 FLGLANAIVWPAVWPLALSGLGKLTSTGSALLIMGIAGGAFGPLFWGLTSSATDMGQQGG 408
            LG  NA+++  +WPL++ GLGK T TGS+LLIMG+ G A  PL +G    A     + G
Sbjct: 356 ALGFPNALIYAGIWPLSIHGLGKFTKTGSSLLIMGLCGNAILPLVYG--HFADQYSLRIG 413

Query: 409 YMVMLPCYLFILFYAVKGHKMRHW 432
           Y V++PC+++++F+A+KGHK+  W
Sbjct: 414 YWVLIPCFIYLVFFAIKGHKINSW 437