Pairwise Alignments

Query, 240 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 262 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score = 85.1 bits (209), Expect = 1e-21
 Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 32/232 (13%)

Query: 13  VVGLALTTSLFSGIAAAE-------VSGEISVTNDYRFRGISQTAGDPAVQGGVDWSFE- 64
           ++  A+  S  S +A AE        S   +V +DYR+RG++QT  DPA+Q G D++   
Sbjct: 5   ILATAIAASFVSTVARAEDAKPDNEFSFNAAVVSDYRYRGLTQTRFDPALQVGADYTHNP 64

Query: 65  SGFSVGAWASNVDF--------DEPGYNGPDIEYDFYVAYGGDINDNVSYDVTLNRYNY- 115
           +G   G W +N+ +          P     DIE+D Y    GDI    +YDV    Y Y 
Sbjct: 65  TGLYAGTWLTNIKWIKDAGAVASPPVNTKGDIEWDIYGGKRGDIGGGFTYDVGGLYYYYP 124

Query: 116 ------SGESDLGYFEVTAGVEFSG--FRVAYWYTNDYGGSDLDY-HYGEINYSYEFVEN 166
                 SG  +   FE+   V +    F+ +   TN +G ++  Y  Y ++  + E    
Sbjct: 125 GNTLADSGAKNANTFELYGQVGYGPGYFKYSQSLTNLFGAANSKYSQYFDLGANIETYYG 184

Query: 167 WSLDLHYGYNVGDALDDGEGFDSYSDYSVGVSTEF---MGFGLSLAWLGTDL 215
             L LH G+   +   +   F SY+D+ +GVS  F    G  L LA++GTDL
Sbjct: 185 VILGLHVGHQ--NVRGNPNQF-SYTDWKIGVSKTFDDLAGITLGLAYVGTDL 233