Pairwise Alignments

Query, 366 a.a., general secretion pathway protein B (RefSeq) from Shewanella sp. ANA-3

Subject, 370 a.a., general secretion pathway protein B (RefSeq) from Shewanella amazonensis SB2B

 Score =  214 bits (544), Expect = 4e-60
 Identities = 160/400 (40%), Positives = 210/400 (52%), Gaps = 64/400 (16%)

Query: 1   MSILLDAVTRNKQQQTSPLPDAVLTPRASYPTARKSAFPVAKLSLLAVAVALGVGVAWGV 60
           MSILLDAVTR+KQQ+     D V +PR  Y   +    P  KL LL  A++L V  AWGV
Sbjct: 1   MSILLDAVTRSKQQENGF--DPVSSPRPQYRPEKAPIRP-GKLLLLPAALSLAVAAAWGV 57

Query: 61  ANW----QQQNSMPIVNAAPSTIN---PSMADTKVENTPQTAS----SVQPSAEGVRASS 109
            +W      Q+S+P+V+ A        PS +   V +    AS    SV+P     +A+S
Sbjct: 58  NSWILQPAPQSSLPLVSQAGEARTGNGPSGSAKAVTSHSNPASTQTLSVRPPV--TQAAS 115

Query: 110 GAVTNAALQTGGSEQTTAESSGFRLAGKVALPREQ-------VLNEAPANVQPY------ 156
             V +A+  TG         +G RLAGK ALP          ++N+AP  V P       
Sbjct: 116 EPVISASSDTG---------NGVRLAGKAALPAPVNLNTDYGMVNQAPLAVDPNADLSYE 166

Query: 157 LSSNMSSIPAATASASTSADPSYDDYLATSAALDETTRTQQSSVEDVAPQDTSESEPIML 216
           ++   +   AA   A  +A  + D       A DE  + ++S    V  Q  +   P   
Sbjct: 167 VAEETAEARAARLEALMAAGVTDDQ----RRAFDEVMQIEESRPRQVLTQSQNVRAP--- 219

Query: 217 GANANRQGLATLEALREQVNAAAADVGLETAQSRKE----------DELVANFQDALKDV 266
                 QG+A L+A   +V+ AAA+ GL+  + +            D LV  F+ ALK+V
Sbjct: 220 ----RDQGMAALQA---EVDKAAAEFGLQRTEPKPASRDDSNTLSGDALVQAFEAALKEV 272

Query: 267 EYVKAAKTPVTEPKLDPIPKVENDDIPKYGQLPAGLQLQVPEFNIVAHVYSTDASQRWLN 326
           E+ ++A   VT   +  IP  +  D P+YG LPAGLQLQVPEFNI+AHVYS D SQRWLN
Sbjct: 273 EFTESANREVTPAPVSTIP--QTSDYPRYGDLPAGLQLQVPEFNIMAHVYSNDPSQRWLN 330

Query: 327 VDGAELQEGDQIGGKLKIIAIRPRDVVLEIQGTQFRVPAI 366
           VDG ELQEGD I G L I+ IRPRDVVL I GT F+VPAI
Sbjct: 331 VDGTELQEGDNIKGSLSIVEIRPRDVVLSIDGTAFKVPAI 370