Pairwise Alignments

Query, 364 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

Subject, 424 a.a., hemolysin D from Burkholderia phytofirmans PsJN

 Score =  111 bits (277), Expect = 4e-29
 Identities = 85/347 (24%), Positives = 162/347 (46%), Gaps = 16/347 (4%)

Query: 6   ATPGKASKYATLGLLALIVILL---LWYLVADRMTPYSSQARVQAFVVPIATEVTGQILK 62
           A  GK  +  TL ++ +++  +   L+Y +  R    +  A V   VV I  +VTG ++ 
Sbjct: 29  ANNGKRKRMMTLLVIVILIAAIAYGLYYFLVARFHEDTDDAYVNGNVVQITPQVTGTVVA 88

Query: 63  VYVQDNQDVAEGAPLFDIDPEPYDIALAKAKSDYETVLNSVKANNEGVKAAEAKLQAMRA 122
           V   D Q V  G PL  +DP    +AL +A+++    +  V+         +A++   +A
Sbjct: 89  VNADDTQTVKVGDPLVVLDPADARVALEQAEANLAQTVRQVRGLFADDNQYQAQVAQRQA 148

Query: 123 SYNNSVKDAERQERLYRQDPGAISVRRLEIAQASRETASSQVTAAEADVR--RAIEAAGV 180
             + +  D +R  RL     GA+S   +  A+ + ++A + V AA+  +   RA+  A  
Sbjct: 149 DLSRAQDDLKR--RLTVAQTGAVSQEEISHARDAVKSAQAAVDAAQQQLNSNRAL-TANT 205

Query: 181 NGENNSQLLSARSAVNKAERDRQNTHVVAPSRGVITDLNTDVGQFINAGAPAMTLIAIHD 240
              N+  + +A + V  A  +    ++ AP  G +   +  VGQ ++ G P M ++ +  
Sbjct: 206 TIANHPNVQAAAAKVRDAYLNNARNNLPAPVTGYVAKRSVQVGQRVSPGTPLMAIVPLGG 265

Query: 241 VWISADLTENNLGNIKVGNRVSILLDSMPGQ-LFSGQIRSIGYGVDDGKKQAVGSLPTVS 299
           VW+ A+  E  L ++++G  V +  D      ++ G++     G   G   A   LP  +
Sbjct: 266 VWVDANFKEVQLKHMRIGQPVELTADVYGSSVVYHGKV----VGFSAGTGSAFSLLPAQN 321

Query: 300 NSRDWLRQAQRFPVKVSFSADDMPPAANLRVG--GQADILVYTEEHG 344
            + +W++  QR PV+++    ++     LR+G   QAD+ +  +  G
Sbjct: 322 ATGNWIKVVQRLPVRIALDPKELEQHP-LRIGLSMQADVSIKDDNGG 367