Pairwise Alignments

Query, 293 a.a., farnesyl-diphosphate synthase (RefSeq) from Shewanella sp. ANA-3

Subject, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  317 bits (813), Expect = 2e-91
 Identities = 168/293 (57%), Positives = 211/293 (72%), Gaps = 2/293 (0%)

Query: 2   LVNAIKEYQLRVDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVP 61
           ++ A+  YQ R + QL Q  + +      L  AM +G LLGGKR RP+LVY  GQM G  
Sbjct: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60

Query: 62  LEKLDASAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLAF 121
           L  LD  A+A+ECIHAYSLIHDDLPAMDDD+LRRG+PT HI FDEATAIL GDALQTLAF
Sbjct: 61  LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120

Query: 122 EIVTEAVPGISSE-QHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKT 180
            I+ E     + E Q +AM++ALA+ASG +GMC GQA+DLA+ ++LI L+ L  +H  KT
Sbjct: 121 TILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180

Query: 181 GALISCAVEL-ALIAANAPKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSD 239
           GAL+ CA+ L AL A    +     +  +A AVGLAFQVQDDILDII+ TE LGKPQGSD
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240

Query: 240 AESNKSTFPQLLGLQGAKDTAAQLIQEALSALAKLPYNSQLIADFARYIIERR 292
            E NKST+P LLGL+GA+  A  L+QEAL AL  +PYN++ + +FARY++ER+
Sbjct: 241 QELNKSTYPALLGLEGAQQKAHTLLQEALLALEAIPYNTEHLEEFARYVVERK 293