Pairwise Alignments

Query, 293 a.a., farnesyl-diphosphate synthase (RefSeq) from Shewanella sp. ANA-3

Subject, 302 a.a., geranylgeranyl pyrophosphate synthase from Dechlorosoma suillum PS

 Score =  225 bits (573), Expect = 1e-63
 Identities = 131/275 (47%), Positives = 168/275 (61%), Gaps = 3/275 (1%)

Query: 20  RFSTLEDTAPQ-LKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDASAAAIECIHAY 78
           RF    +T PQ L  AM + AL GGKR+RP L ++ G++ G   E LD  A A+E IH Y
Sbjct: 28  RFLPAAETIPQGLHDAMRYSALGGGKRVRPLLAFAAGELCGATAEALDCVACAVEMIHVY 87

Query: 79  SLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGISSEQHIA 138
           SL+HDDLP MDDD LRRG+PT H+ +DE TA+L GDALQ+ AFEI+  A P  S  Q + 
Sbjct: 88  SLVHDDLPCMDDDVLRRGRPTCHVQYDEPTALLVGDALQSRAFEILA-AQPWPSPAQGLE 146

Query: 139 MVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKTGALISCAVEL-ALIAANA 197
           +VR LA  SG  GM GGQAIDLAS  K +D   L  +H +KTGALI  AV + A      
Sbjct: 147 LVRLLAHGSGSCGMAGGQAIDLASVGKSLDQPQLELMHALKTGALIRAAVLMGAHCGTPL 206

Query: 198 PKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESNKSTFPQLLGLQGAK 257
              E + +  FA   GL FQV DDILD  A+T  LGK  G D  ++K T+ +LLGL+ A+
Sbjct: 207 AAAELERLDAFAKRAGLLFQVVDDILDCTASTATLGKTAGKDEAADKPTYVRLLGLETAR 266

Query: 258 DTAAQLIQEALSALAKLPYNSQLIADFARYIIERR 292
             A  L ++AL AL      ++ + + A YI  R+
Sbjct: 267 QLADDLRRDALGALEGFGPRARRLIELAHYITTRK 301