Pairwise Alignments

Query, 336 a.a., isocitrate dehydrogenase (RefSeq) from Shewanella sp. ANA-3

Subject, 353 a.a., 3-isopropylmalate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  202 bits (513), Expect = 1e-56
 Identities = 127/349 (36%), Positives = 187/349 (53%), Gaps = 26/349 (7%)

Query: 6   ITVIPGDGIGPSI----IDSALKILDKAGCDFEYEFADAGLTALEKQGELLPQRTLELIE 61
           I V+ GDGIGP I    +D    + +K G    YE+A  G  A++K G+  P+ T E+ +
Sbjct: 5   IAVLAGDGIGPEISVQGVDVMSAVCEKFGHKVSYEYAICGADAIDKVGDPFPEETYEVCK 64

Query: 62  KNRITLKGPLTTPVGEGFTSINV-------TLRKKFGLYANVRPVLSFKGTQAR------ 108
                L   +  P  +   +  V        +RKK GL+AN+RPV +FK    +      
Sbjct: 65  NADAVLFSAVGDPKFDNDPTAKVRPEQGLLAMRKKLGLFANIRPVQTFKCLIHKSPLRAE 124

Query: 109 -YENIDIITVRENTEGMYSGHGQKVSEDGTTAEATSIVTRQGAEQIATFAYELARKENRK 167
             EN D I +RE T GMY G      +D   A  T+  TR   E+I   A+E A K  RK
Sbjct: 125 LVENADFICIRELTGGMYFGEKY---QDNDKAYDTNYYTRPEIERILKVAFEYAMKR-RK 180

Query: 168 KVTIVHKANIMKSTSGLFLKVAREVSQRYPDIKTEEMIVDATCMKLVMNPENFDVIVTTN 227
            +T+V KAN++ S S L+ ++A+E++  YP++ T+ M VD   MK++  P  FDV+VT N
Sbjct: 181 HLTVVDKANVLAS-SRLWRQIAQEMAPNYPEVTTDYMFVDNAAMKMIQEPAFFDVMVTEN 239

Query: 228 LFGDILSDLCAGLVGGLGMAPGANIGRDAAIFEAVHGSAPDIAGKNLANPTSVILASIQM 287
            FGDIL+D  + + G +G+ P A+ G    +FE +HGS P   G N+ANP + IL+   +
Sbjct: 240 TFGDILTDEGSVISGSMGLLPSASTGESTPVFEPIHGSWPQAKGLNIANPLAQILSVAML 299

Query: 288 LEYLGMADKADLIRKAVSAVIEEGDRTTRDL---GGTHGTTDFTQAVLD 333
            EY    ++  LIRKAV A ++E  RT       G  +GT +  Q ++D
Sbjct: 300 FEYFDCKEEGALIRKAVDASLDENVRTPEIQVADGAKYGTKEVGQWIVD 348