Pairwise Alignments

Query, 304 a.a., recombination associated protein (RefSeq) from Shewanella sp. ANA-3

Subject, 308 a.a., recombinase RdgC from Herbaspirillum seropedicae SmR1

 Score =  177 bits (450), Expect = 2e-49
 Identities = 104/298 (34%), Positives = 162/298 (54%), Gaps = 3/298 (1%)

Query: 1   MWFKNLTLYRFNKPFSIETEALETALADFTFSPCGSQDVSKFGFSNALGKQGSTLVHSAN 60
           MWFKNL +YR   P++I  + LE+ LA   F+ C S D+   G+     +    LVH  N
Sbjct: 1   MWFKNLQIYRLPAPWAISADELESHLAPQAFTACSSLDMQSQGWVPP--RNNEKLVHVVN 58

Query: 61  NRHLICVTKEEKILPGQVIKESLEEKVAQIEDEENRKLAKKEKDALKDEIITSLLPRAFS 120
            + L+ +  E+K+LP  VI +  + + A++E+++     +K+   LK+++   LLPRAFS
Sbjct: 59  RQLLMKLDTEKKLLPSTVINQVTKARAAELEEQQGFPPGRKQTKELKEQVTDELLPRAFS 118

Query: 121 RRSQTRALILPELEMILVDSSSATKAEELLALLRKALGSLPVIPLSFKAPVEANLTQWLK 180
               T   I P    +LVD+ S +KAEE+L LL KA+   P+  L       A +T WL 
Sbjct: 119 VVRSTWVWIDPVNGWLLVDAGSPSKAEEVLKLLFKAIPKFPLETLRTVMSPAAAMTDWLA 178

Query: 181 DGSAPLPFEMQDEAELKSAADEGGIVRFKQQDLKEDEVLAHLETGKEVHKLALHFGQSIA 240
              AP  F +  + EL+S A+    VR+ +  L+ +++  H+E GK+  +LAL +   ++
Sbjct: 179 SDEAPNGFTVDQDTELRSTAESKATVRYVRHTLEAEDIRRHIEAGKQCTRLALTWADKVS 238

Query: 241 LLLQSDASVKRLKFSEEFRAGNDELGNEDPMARLDADFALMGSELVALMHALVSALGG 298
            +L  + SVKR+   +  +  ++  G  D   R D DF LM  EL  L+ ALV ALGG
Sbjct: 239 FVLTENLSVKRIAPLDVLKEDSEIAGKNDD-ERFDGDFMLMTGELAKLLTALVDALGG 295