Pairwise Alignments

Query, 246 a.a., SpoOM family protein (RefSeq) from Shewanella sp. ANA-3

Subject, 280 a.a., sporulation control protein Spo0M from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (255), Expect = 6e-27
 Identities = 81/245 (33%), Positives = 111/245 (45%), Gaps = 22/245 (8%)

Query: 3   KKLLASVGIGGATVDTQLIDNRLLPGQIFHATIVVKGGNVPQQISGLDLALMTK--VKVS 60
           KK LAS GIG A VD+ L    L PGQ     I V GG   Q I  ++L L      +V+
Sbjct: 22  KKTLASFGIGSAKVDSVLQQEVLYPGQSVKVIIHVYGGATAQVIDNIELKLCCCYIAEVA 81

Query: 61  SDNGDYF--------KNHRLASWRLTESFEIQAGEIREIPFSGKLHPETPFTQLPVRNNQ 112
            + G             + LA+W L  +F I+AGE R       +   TP T        
Sbjct: 82  DERGQQQGQPMRRVPHTYTLANWSLPYAFTIEAGETRNFDIELSIPWNTPVTI-----GD 136

Query: 113 SQVWLQTGVDIDTALDPSDIDALVIMPTAIAEHVLKAMDALGFVLVKADVEQGFLNTRAF 172
           ++VWL+TG+DI  ALDP+D D L + P  + + +  A++A G  L + + EQ       F
Sbjct: 137 AKVWLETGLDIALALDPTDKDILTVRPEPMMDGIFSALEAQGLRLRQVECEQAKGFALPF 196

Query: 173 RSTSGCYQELEFKPRNMGF-NRLREIEVSLVCDAEQTHVLLELDRAFRGDGYLYFSLPNN 231
                  QE EF P    F  R RE+E+    D E   +  E+DR  RG   +  SL   
Sbjct: 197 ------VQEFEFVPTTGPFQGRWREVEIVAYRDPEALQLWFEVDRYQRGASGMLASLLGR 250

Query: 232 ATLSQ 236
             L +
Sbjct: 251 GELKR 255