Pairwise Alignments

Query, 861 a.a., PII uridylyl-transferase (RefSeq) from Shewanella sp. ANA-3

Subject, 900 a.a., protein-PII uridylyltransferase from Pseudomonas fluorescens FW300-N2C3

 Score =  662 bits (1709), Expect = 0.0
 Identities = 360/865 (41%), Positives = 526/865 (60%), Gaps = 17/865 (1%)

Query: 8   KQSLIEQNQTLLARFKAKTPIEELVTQRCQFVDSLVKQAWQQHGLDQ-YPIALIAVGGYG 66
           K+++ + ++ L  RF+    I  L+  R  FVD+++++AW+Q    +   IAL+AVGGYG
Sbjct: 29  KKAIRQAHEVLDQRFRNGRDIRRLIEDRAWFVDNILQKAWEQFDWSEDADIALVAVGGYG 88

Query: 67  RGELHPHSDVDLLFLFEGELSKAAETALSEFIAFLWDASLEIGHSVRTLSDTLNLGREDI 126
           RGELHP+SD+DLL L +    +    ++  F+  LWD  LE+G SVR++ +     R D+
Sbjct: 89  RGELHPYSDIDLLILLDSADHEVFRDSIERFLTLLWDIGLEVGQSVRSVQECAEEARADL 148

Query: 127 TIATNLLEARLLSGPETLFDQLYDAIRQSDFWTSSQFFIAKRDEQTARHAKAS--AFDLE 184
           T+ TNL+E+R ++GPE L  ++ D       W S  FF+AK  EQ ARH K +   ++LE
Sbjct: 149 TVITNLMESRTIAGPERLRQRMLDVTSTEHMWPSKDFFLAKHAEQKARHHKYNDTEYNLE 208

Query: 185 PNIKSCPGGLRDIQTIAWVAMRHFGASRLEELVQYEFLEPAELEELLECQHFLWKLRFAL 244
           PN+K  PGGLRDIQTI WVA R +G   L  L    FL  +E   L   Q FLWK+R+AL
Sbjct: 209 PNVKGSPGGLRDIQTILWVARRQYGTLNLRALAGEGFLVESENALLASSQEFLWKVRYAL 268

Query: 245 HMAVGRDENRLLFDVQRQVAELMGYE--DATQLAVEQMMKRYYRTVRRVMELNEMLLQLF 302
           HM  GR E+RLLFD QR +A L+G+E  DA Q ++E  M++YYR V  + +L+E+++Q F
Sbjct: 269 HMLAGRSEDRLLFDHQRSIAGLLGFEGQDAKQ-SIENFMQQYYRVVMSIAQLSELIIQHF 327

Query: 303 KRATLGQTKALEIQAIDNNYQRRGAFIEALRDDLFDSGE-EIVRLFVHVAKNSNIKGIYA 361
           +   L        Q I++ +Q    +IEA   ++F      ++ +FV +A+   IKG+ A
Sbjct: 328 EEVILAPEDEEPPQPINSRFQLHDGYIEARNANVFRRTPFAMLEIFVLMAQQPEIKGVRA 387

Query: 362 PTLRSLRRARRAQQQPLQENPQCRQAFMEILKHPRGIAA-LSLMHKHGVLSAYLPAWRNI 420
            T+R LR  R    +  + + +    F+E+ K   G+   L  M+++G+L  YLP +  I
Sbjct: 388 DTIRLLRENRHLIDEDFRHDIRNTSLFIELFKCKIGVHRNLRRMNRYGILGRYLPEFGFI 447

Query: 421 EGQMQFDLFHAYTVDEHTHRLLLNIERFSQPEQKEEFPLGSVLINQLPKKGLLVLGAIFH 480
            GQMQ DLFH YTVD HT  L+ ++ +    +  E+FPL S L+ +LPK  L+ +  ++H
Sbjct: 448 VGQMQHDLFHIYTVDAHTLNLIKHLRKLQYTQVSEKFPLASKLMGKLPKPELIYMAGLYH 507

Query: 481 DIAKGRGGDHSKLGSSDALAFCKLHGLNDHDGRLVAWLVENHLVMSVTAQRRDISDPDVV 540
           DI KGR GDHS++G+ DA AFC+ H L   D RL+ WLV+NHLVMS TAQR+D+SDP V+
Sbjct: 508 DIGKGRQGDHSEIGAVDAEAFCQRHQLPLWDSRLIVWLVQNHLVMSTTAQRKDLSDPQVI 567

Query: 541 ADFASKVRDAVHLSYLYCLTVADICATNEKTWNNWKGSLLRDLYFSTQRVLARGKEKPVD 600
            DFA  V D   L YLY LTVADI ATN   WN+W+ SLLR LY  T+R L RG E PVD
Sbjct: 568 HDFAQIVGDETRLDYLYVLTVADINATNPSLWNSWRASLLRQLYTETKRALRRGLENPVD 627

Query: 601 IRARVREYQAKAKKELLRRGVKEKELDTLWQRFKADYFLRHQPNQVAWHAEAILKHKQLD 660
              ++R  Q+ A   L+R G    +++ LW +   DYFLRH    VAWH++AIL+     
Sbjct: 628 REEQIRRTQSAALDILVRGGTDPDDVEQLWSQLGDDYFLRHTAGDVAWHSDAILQQPADG 687

Query: 661 EPLVLVSKHTTR---GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALD 717
            PLVL+ + T R   GGT++F+Y  D+   FA  +A +D  N+N+HDA ++TS   + LD
Sbjct: 688 GPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLD 747

Query: 718 TFVILEQDGAPV-SQLSRIQSIRKALEKAL--ASDNPKLPRFRKLSRKMKPFNVPTQVSF 774
           T+++L+ DG  +    +R++ IR  L +AL   +D P + + R++ R++K F    QV+ 
Sbjct: 748 TYIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQ-RRVPRQLKHFAFAPQVTI 806

Query: 775 LESNRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFILQTNDGL 834
               +   +++EL A D PGLLA++G IF   + +L  AKI T+GER ED F +      
Sbjct: 807 HNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQ 866

Query: 835 QLNETQE-NTLKEALISALSAINTE 858
            L++ Q  + L+EA++  LS +N E
Sbjct: 867 PLSDPQLCSRLQEAIVRHLS-VNQE 890