Pairwise Alignments

Query, 1082 a.a., SNF2-related protein (RefSeq) from Shewanella sp. ANA-3

Subject, 1161 a.a., SNF2-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  469 bits (1207), Expect = e-136
 Identities = 271/664 (40%), Positives = 396/664 (59%), Gaps = 72/664 (10%)

Query: 486  ELDDSQEGWFSLSLHADINGQRLPMLPLVATWLKQ------------------HGEPADD 527
            E++ + + WF LSL  ++ G+R+ +LPL+   ++Q                  +G     
Sbjct: 492  EVNSADKDWFELSLGVEVEGKRVNLLPLLVNLIRQGKLSRDFNQATSGEQSGANGSADQP 551

Query: 528  AELLLPSPSGEWLKIKASVIKPLMSIIQELFEQ---HRGQSIALPKY---RAHLLNE-LA 580
             E+ L   SG  L + A+ I+ +++++ ELF Q   +  + + L ++   R  LL++ L+
Sbjct: 552  QEVALELESGAILTLPAARIQRILAVLDELFTQQPLNDQEKLVLARHHLGRIPLLDDALS 611

Query: 581  ESEISLL-NGE-RVRQLATKLAEFN-----------GVVAVSAPTGLNAQLRAYQQQGLN 627
            +SE +L  +GE ++RQ A  L  +            G +    P GLNA+LR YQ +G+ 
Sbjct: 612  QSEQALTWSGEAKLRQHAKALGRYLNEQQSRRADRLGTIDFVTPDGLNAELRPYQVEGVA 671

Query: 628  WLCFLKEYQLGGILADDMGLGKTIQTLAFLLKQQEAKSVGQPRLPSLIICPTSLVGNWAK 687
            WL F+K +  G ILADDMGLGKT+QTL  +L  ++A   G  + P L+I PTSL+ NW +
Sbjct: 672  WLQFIKRHGFGAILADDMGLGKTLQTLCSILLDKQA---GVTKAPVLVIAPTSLLSNWQR 728

Query: 688  EAAKFAPSLTLAVIHGAQRGPLLSRLSEFDVVVTTYPLMVRDYDYYQAQPFEHIVLDEAQ 747
            E A+F PSLT  V  G  R      L++ DV++T+Y ++ +D +      +  ++LDEAQ
Sbjct: 729  EIAQFTPSLTSFVWSGRARHDNEQALTDVDVLITSYGILAQDAERLTKLNWHQVILDEAQ 788

Query: 748  QIKNAQAKVSQQIKALQAPFRLCLTGTPLENHLGELKSLMDFCLPGLLGTTAYFNKAFRY 807
             IKN+++++++ +  LQ   RLCLTGTP+ENHLGEL SL  F +PG LGT   F + F+ 
Sbjct: 789  TIKNSRSRITKLVNRLQTQHRLCLTGTPMENHLGELWSLFHFLMPGFLGTATQFQRQFKQ 848

Query: 808  RIERYGDSEQAKVLSQRIAPFVLRRTKAEVVTELPPKTEILQTLELEKDQRNLYESIRLS 867
             IE+       + L+QR+APF+LRRTK++V TELP KT I   +EL + Q +LYE+IRL+
Sbjct: 849  PIEKDHCDASRQRLAQRLAPFMLRRTKSQVATELPTKTVINTLIELSQSQSDLYETIRLT 908

Query: 868  MEKKIRELFATQGVAGSHIEFLDALLKLRQACCDPRLVKLEQAQKV-------------- 913
            + ++++      G   + +   +ALLKLRQ CC P ++ L Q  +V              
Sbjct: 909  VAEQVQLALRQTGAKANRLMISNALLKLRQVCCHPAMLNLGQLGQVGETENSKVAISPEV 968

Query: 914  -----------------KNNAKLNWLNQNLPEMVQEGRKILIFSQFTSMLLLIEELLQSL 956
                               ++KL WL   LP M+++GR ILIFS FTSML LI E L+  
Sbjct: 969  NLSQSVTGLDGAQDELNAESSKLAWLENKLPSMIEDGRNILIFSSFTSMLDLIAEQLERQ 1028

Query: 957  NIDYSKLTGQTRLRQGQIDKFQEGDTPVFLISLKAGGTGLNLTAADTVIHYDPWWNPAAE 1016
             I Y  LTG++R R   I++F+ G+  VFLISLKAGG+GLNLT AD VIH DPWWNPAAE
Sbjct: 1029 QIGYEMLTGRSRHRDRIIERFRRGEVNVFLISLKAGGSGLNLTEADVVIHVDPWWNPAAE 1088

Query: 1017 KQATDRAHRIGQENPVFVYKLIAEGTVEEKIQEMQQHKQGLADSILEGKGKGAWQGSADE 1076
            +QA+DRA+RIGQ+ PVFVYKLI + TVEE+IQ++QQ KQ LA S+ + +   A +   D+
Sbjct: 1089 EQASDRAYRIGQDKPVFVYKLICQNTVEERIQQLQQSKQALAQSMYQTESLTAAEMDRDD 1148

Query: 1077 LLSL 1080
             L+L
Sbjct: 1149 WLAL 1152



 Score = 38.1 bits (87), Expect = 4e-06
 Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 14/186 (7%)

Query: 12  LTQTAIESLFTPPTLMRARDYVMQGRVLSAKANADFRHIEGTVTGTETTPYRQDIRLVSV 71
           L QTA++  F+      A   ++  R+L  +  A    I G   G      +     VS+
Sbjct: 2   LLQTAVQE-FSHQERFSALQALLGDRLLECQRQAHI--IRGIFAGEPKITCQ-----VSL 53

Query: 72  NHKLVMNGFCSCPASGNCKHMAAVLYSLLTDKTVEDQ----RIAQWLHLLDEADDPNMND 127
           N +  ++G C C     C H AA++      + +++Q    R    + L         + 
Sbjct: 54  NDQGKISGRCDC-GQPRCAHQAALVIEQAARRALDEQGRSRRSDTAIRLFRSDLKERFDP 112

Query: 128 VESLYDDRVLYILSKDDNGVFIELRRGKLGKKGGYNKGTKIALSDVQYY-MPAWIGAEDV 186
             ++   R+LY+L   + G+ +++ +G L K G Y     +    +Q   +P ++   D+
Sbjct: 113 FPTMARHRILYLLVPSETGLQLKVLKGYLNKNGRYQLKGPLGFELLQSQPVPKYVSQTDL 172

Query: 187 LILNLI 192
            +L+ +
Sbjct: 173 KLLHTL 178