Pairwise Alignments

Query, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

Subject, 381 a.a., acyl-CoA dehydrogenase AcdA from Phaeobacter inhibens DSM 17395

 Score =  407 bits (1046), Expect = e-118
 Identities = 196/380 (51%), Positives = 269/380 (70%)

Query: 1   MDFNFNEDQRQFADLARQFAADELAPFAAKWDEEHHFPKDVIQKAGELGFCSLYSPESEG 60
           MDF   E+Q    D+A  F  + +APFA +W+ E   PK +  + GELGF +LY  E  G
Sbjct: 1   MDFALTEEQTAIFDMAFAFGQEHIAPFARQWEAEGTIPKSLWPQIGELGFGALYVSEETG 60

Query: 61  GMGLSRLDASIIFEELSKGCTATTAMLTIHNMATWMVTTWGTDTLRQAWSEPLTTGQMLA 120
           G GLSRLDA+++FE LS  C +  A L+IHNM   M+ ++ +D ++      + + + + 
Sbjct: 61  GAGLSRLDATLVFEALSMACPSVAAFLSIHNMCAKMLDSFASDEMKARIMPDILSMKTVL 120

Query: 121 SYCLTEPGAGSDAASLQTKAVREGDEYVVSGSKMFISGAGSTELLVVMCRTGQAGPKGIS 180
           SYCLTEPG+GSDAA+L+T+A +  + Y ++G+K FISG G ++  V M R+G+ GPKG+S
Sbjct: 121 SYCLTEPGSGSDAAALKTRAAKTNEGYTLNGTKAFISGGGYSDAYVCMVRSGEDGPKGVS 180

Query: 181 AIAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEGQGFTFAMKGLDGG 240
            + +   + G+ +G  E+KMGW +QPT  V FD+ ++P ANL+GEEG+GFT+AMKGLDGG
Sbjct: 181 TVYVEDGTAGLSFGGLEEKMGWKSQPTAQVQFDDCKIPAANLVGEEGKGFTYAMKGLDGG 240

Query: 241 RINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQMVRLA 300
           R+NIA+CS+G AQ AL    QYM+ER+ FGK +  FQ LQF+LADM  EL AAR  +R A
Sbjct: 241 RLNIASCSLGAAQQALTMTLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARVFLRQA 300

Query: 301 AFKLDSGDPEATAYCAMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRDVRVHQI 360
           A+KLD G P+A+ +CAMAK+F T+ G +V D  LQ+HGGYGY+ +Y +E+  RD+RVHQI
Sbjct: 301 AWKLDQGAPDASKHCAMAKKFVTEAGSKVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQI 360

Query: 361 LEGTNEIMRLIIARRLLDEN 380
           LEGTNEIMR+I AR LL EN
Sbjct: 361 LEGTNEIMRVITARHLLAEN 380