Pairwise Alignments

Query, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

Subject, 381 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  411 bits (1057), Expect = e-119
 Identities = 201/377 (53%), Positives = 265/377 (70%)

Query: 1   MDFNFNEDQRQFADLARQFAADELAPFAAKWDEEHHFPKDVIQKAGELGFCSLYSPESEG 60
           MDF  +E+Q    D+AR F A+ +AP A  W+++   PK +  +   LGF  LY  E  G
Sbjct: 1   MDFALSEEQSAIFDMARDFGAENIAPHALAWEKDGTIPKTLWPELAALGFGGLYVTEESG 60

Query: 61  GMGLSRLDASIIFEELSKGCTATTAMLTIHNMATWMVTTWGTDTLRQAWSEPLTTGQMLA 120
           G GLSRLDA+++FE LS  C +  A L+IHNM   M+  +G+D ++  +  P  T + + 
Sbjct: 61  GSGLSRLDATLVFEALSMACPSVAAFLSIHNMCAAMLDKFGSDDVKARFLPPALTMETVF 120

Query: 121 SYCLTEPGAGSDAASLQTKAVREGDEYVVSGSKMFISGAGSTELLVVMCRTGQAGPKGIS 180
           SYCLTEPG+GSDAA+L+T+A R  + Y ++G+K FISG G ++  +VM RTG+ GP+GIS
Sbjct: 121 SYCLTEPGSGSDAAALKTRAERTNEGYRLTGTKAFISGGGYSDAYIVMARTGEDGPRGIS 180

Query: 181 AIAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEGQGFTFAMKGLDGG 240
           ++ +   + G+ +G  EDKMGW AQPTR V  D+  VP ANLLGEEG GF +AM GLDGG
Sbjct: 181 SLIVEDGAPGLSFGGLEDKMGWRAQPTRQVQLDDCAVPAANLLGEEGAGFRYAMMGLDGG 240

Query: 241 RINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQMVRLA 300
           R+NIA CS+G AQAAL+    YM ER+ FGKP+  FQALQF+LAD   EL AAR  +R A
Sbjct: 241 RLNIAACSLGAAQAALDATVAYMGERRAFGKPIDQFQALQFRLADAEIELQAARVFLRQA 300

Query: 301 AFKLDSGDPEATAYCAMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRDVRVHQI 360
           A+KLD G P+AT +CAMAK+F T+ G +V D  LQ+HGGYGY+ +Y +E+  RD+RVHQI
Sbjct: 301 AWKLDQGAPDATTHCAMAKKFVTEAGSRVADQCLQLHGGYGYLADYGIEKLVRDLRVHQI 360

Query: 361 LEGTNEIMRLIIARRLL 377
           LEGTNEIMRL+ AR LL
Sbjct: 361 LEGTNEIMRLLTARALL 377