Pairwise Alignments

Query, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

Subject, 377 a.a., acyl-CoA dehydrogenase from Ralstonia sp. UNC404CL21Col

 Score =  297 bits (760), Expect = 4e-85
 Identities = 153/378 (40%), Positives = 232/378 (61%), Gaps = 3/378 (0%)

Query: 1   MDFNFNEDQRQFADLARQFAADELAPFAAKWDEEHHFPKDVIQKAGELGFCSLYSPESEG 60
           MD  + E+QR   D AR FA + LAP AA+WD +   P +V+++ GELG   +  P   G
Sbjct: 1   MDDFYTEEQRMIHDAARDFATERLAPNAAQWDRDGALPDEVVREMGELGLLGMIVPAEWG 60

Query: 61  GMGLSRLDASIIFEELSKGCTATTAMLTIHN-MATWMVTTWGTDTLRQAWSEPLTTGQML 119
           G     +  ++  EE++ GC A+  M+++HN +    +  +GT+  +  +   L TG+ +
Sbjct: 61  GSYTDYVAYALALEEVAAGCAASATMMSVHNSVGCGPILKFGTEAQKARYLPDLATGRAI 120

Query: 120 ASYCLTEPGAGSDAASLQTKAVREGDEYVVSGSKMFISGAGSTELLVVMCRTG-QAGPKG 178
            ++CLTEP AGS+A +L+T+AV    ++V++G+K F++      + +V   T  +AG +G
Sbjct: 121 GAFCLTEPHAGSEANNLRTRAVLRDGKWVLNGNKQFVTNGARANIAIVFAVTDPEAGKRG 180

Query: 179 ISAIAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEGQGFTFAMKGLD 238
           ISA  +P D+ G   G+ E K+G  A  T  +T ++  VP  NLLGE G+G   A+  L+
Sbjct: 181 ISAFIVPTDTPGFHVGRPEHKLGIRASDTCPITLEDCAVPEENLLGERGEGLKIALSNLE 240

Query: 239 GGRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQMVR 298
           GGRI IA  +VG A+AA + A  Y NER QFGK L   Q +   LADMAT L AAR +V 
Sbjct: 241 GGRIGIAAQAVGIARAAFDAARNYANERIQFGKALREHQTIANMLADMATRLNAARLLVH 300

Query: 299 LAAFKLDSGDPEATAYCAMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRDVRVH 358
            AA +L S D    +  + AK +A+++  ++C  A+QIHGGYGY+ +Y +ERH+RD R+ 
Sbjct: 301 HAA-RLRSADKPCLSEASQAKLYASELAEEICSNAIQIHGGYGYLADYAVERHYRDARIT 359

Query: 359 QILEGTNEIMRLIIARRL 376
           QI EGT+E+ R++IAR +
Sbjct: 360 QIYEGTSEVQRMVIARHV 377