Pairwise Alignments

Query, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

Subject, 377 a.a., acyl-CoA dehydrogenase from Burkholderia phytofirmans PsJN

 Score =  299 bits (766), Expect = 8e-86
 Identities = 152/378 (40%), Positives = 232/378 (61%), Gaps = 3/378 (0%)

Query: 1   MDFNFNEDQRQFADLARQFAADELAPFAAKWDEEHHFPKDVIQKAGELGFCSLYSPESEG 60
           MD  + ++QR   D AR FA ++LAP A +WD E   P +V+++ GELGF  +  P   G
Sbjct: 1   MDSFYTDEQRMIRDAARDFATEQLAPHAGQWDREAQLPAEVVRQMGELGFLGMIVPAEWG 60

Query: 61  GMGLSRLDASIIFEELSKGCTATTAMLTIHN-MATWMVTTWGTDTLRQAWSEPLTTGQML 119
           G     +  ++  EE++ GC A   ++++HN +    +  +GT+  +  + + L TG+ +
Sbjct: 61  GSYTDYVAYALALEEIAAGCAACATLMSVHNSVGCGPILNFGTEAQKDRYLQDLATGRRI 120

Query: 120 ASYCLTEPGAGSDAASLQTKAVREGDEYVVSGSKMFISGAGSTELLVVMCRTG-QAGPKG 178
            ++CLTEP AGS+A +L+T+AV    +++++GSK F++     +L +V   T    G +G
Sbjct: 121 GAFCLTEPQAGSEANNLRTRAVLRDGKWILNGSKQFVTNGSRADLAIVFAVTDPDRGKRG 180

Query: 179 ISAIAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEGQGFTFAMKGLD 238
           ++A  +P D+ G   GK E K+G  A  T  ++ D+  VP ANLLGE G+G   A+  L+
Sbjct: 181 LTAFIVPTDTPGFNVGKPEHKLGIRASDTCPISLDDCAVPEANLLGEPGEGLRIALSNLE 240

Query: 239 GGRINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQMVR 298
           GGRI IA  +VG A+AA + A  Y NER QFGK L   Q +   LADMAT L AAR +V 
Sbjct: 241 GGRIGIAAQAVGIARAAFDAARLYANERIQFGKALKEHQTIANMLADMATRLNAARLLVH 300

Query: 299 LAAFKLDSGDPEATAYCAMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRDVRVH 358
            AA    +G P   +  + AK FA+++  ++C  A+QIHGGYGY+ +Y +ERH+RD R+ 
Sbjct: 301 HAARLRTAGKP-CLSEASQAKLFASELAEEICSNAIQIHGGYGYLEDYAVERHYRDARIT 359

Query: 359 QILEGTNEIMRLIIARRL 376
           QI EGT+E+ R++IAR +
Sbjct: 360 QIYEGTSEVQRMLIARHV 377