Pairwise Alignments

Query, 167 a.a., integrase catalytic subunit (RefSeq) from Shewanella sp. ANA-3

Subject, 279 a.a., transposase, IS3 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  314 bits (805), Expect = 7e-91
 Identities = 151/166 (90%), Positives = 158/166 (95%)

Query: 2   AWVTDITYIKTHEGWLYLGAVMDLFSRRIIGWSMGSRITKELALDALLMAVWRRKPTGKV 61
           AWVTDITYIKTHEGWLYLGAVMDLFSRRIIGWSMGSRITKELALDALLMAVW RKP GKV
Sbjct: 114 AWVTDITYIKTHEGWLYLGAVMDLFSRRIIGWSMGSRITKELALDALLMAVWSRKPAGKV 173

Query: 62  LVHSDQGSQYTSHDWSEFLTAHGLEGSMSRRGSCHDNAVAESFFQLLKRERIKRKIYSTR 121
           LVHS QGSQYTSHDWSEFL+AHGLEGSMSRRG+CHDNAVAESFFQLLKRERIKRKIY+TR
Sbjct: 174 LVHSAQGSQYTSHDWSEFLSAHGLEGSMSRRGNCHDNAVAESFFQLLKRERIKRKIYATR 233

Query: 122 EAAKSDIFNYIDMFYNPKRQHSSNHGLSPLEYERQYFNEAQSCLVK 167
           + AK D+FNYI+MFYNPKRQHSSN GLSPLEYERQYFNE +S LVK
Sbjct: 234 DDAKMDVFNYIEMFYNPKRQHSSNDGLSPLEYERQYFNEVKSRLVK 279