Pairwise Alignments

Query, 686 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella sp. ANA-3

Subject, 566 a.a., alpha-amylase family glycosyl hydrolase from Lysobacter sp. OAE881

 Score =  105 bits (261), Expect = 8e-27
 Identities = 108/424 (25%), Positives = 174/424 (41%), Gaps = 84/424 (19%)

Query: 159 KDVIYLITPDRFANGNPSNDNQSDMLEHAAPDNSD------------GRHGGDIEGIRQH 206
           K+ +Y +  DRF NG+PSND++       A    D            G  GGD +GI  H
Sbjct: 44  KEAVYFVVTDRFVNGDPSNDHRDQGGPDPATRTFDRPTAGSDAGDNVGYLGGDFKGIVDH 103

Query: 207 LDYLAKLGVTQLWINPLLENNQAQYS------------------YHGYAMTNLYRVDPRF 248
           LDY+  +G + LWI P+++N    ++                  YHGY   N Y++D   
Sbjct: 104 LDYIRGMGFSALWITPIVDNPDEAFTGGKPAQKGGFLTDGGKTGYHGYWGVNFYKLDEHL 163

Query: 249 GSNQ-DYQRLVTEAKQHGLGVIKDVVLNHIGSNHWWLKDLPSSDWLNVPQQPNATDTQTA 307
            S   D++ L        + ++ D+V NH GS  +    +P +     PQ     D    
Sbjct: 164 PSKGLDFKGLADAVHGQDMKLVLDIVGNH-GSPAY---SMPKAQ----PQFGQVFDRDGK 215

Query: 308 PAASSTSLSSTNLGFTSHRRTTVQDPYADMQDKRDFVDGWF-----VDSMPDLNQRNPKL 362
             A   +L                 P A +  K D +  ++     +  + D N+  P +
Sbjct: 216 LVADHQNL-----------------PPAKLDPKHDPLHRFYNTTPGLAELSDFNENEPAV 258

Query: 363 ATYLIQNSIWWVEYAGLSGIREDTYSYADKAFLTQWTKALMAEYPHFNIVGE--EWTANP 420
             YL      W+   G    R DT  +    F  ++   +  E P   + GE  E+ A  
Sbjct: 259 MDYLAGAYAQWIGQ-GADAFRIDTIGWLPHPFWHEFVARMRREKPGMFMFGEAFEYDAKK 317

Query: 421 ITVSYWQKGKINADGYSSDLPSLMDFPLYEKLLESL-NEPEGWDTGFIKLYEMLANDVVY 479
           I    W +   NA+       S++DFPL + L ++  +E  G++    +LY    +   Y
Sbjct: 318 IAEHTWAR---NAN------VSVLDFPLKQGLEKAFGHERAGFEVLADRLY---LDGGPY 365

Query: 480 ATPSQLVLFEGNHDTNRIYSLLKENLPLYQMALTYVLTAKRIPQLFYGTEV-LMTSPTEG 538
           A P +L  F  NHD  R+ +  +  +     A  ++ TA+ IP ++YG+E+  M    E 
Sbjct: 366 ANPYELATFYDNHDMARLDATDEGFID----AHNWLFTARGIPVVYYGSEIGFMRGKPE- 420

Query: 539 RHDG 542
            HDG
Sbjct: 421 -HDG 423