Pairwise Alignments

Query, 241 a.a., RNA methyltransferase (RefSeq) from Shewanella sp. ANA-3

Subject, 248 a.a., tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ from Phaeobacter inhibens DSM 17395

 Score =  117 bits (293), Expect = 2e-31
 Identities = 78/231 (33%), Positives = 116/231 (50%), Gaps = 13/231 (5%)

Query: 8   ILVGTSHPGNIGSTARAMKTMGLSTLYLAEPRCEVDG----QSIALAAGASDILKHLVKV 63
           +LV      N+G+ ARAM   GL  + +  PR   DG    +++A+A+GA  +L      
Sbjct: 11  VLVRPQMGENVGAAARAMWNFGLDRMRIVAPR---DGWPNPKAVAMASGAGRLLDEARLA 67

Query: 64  DSLEEAIADCSLVIATSARSRTLDWPMLDPREAGQKLVTEGLTG--PVAIVFGRENHGLT 121
           + L  AI DC  V AT+AR R L  P+  P EA  KL  E +     VA++FG E  GL 
Sbjct: 68  EDLAGAIEDCDFVFATTARPRELTKPVYSP-EAAMKLAAEKIAAGEKVAVMFGPERAGLE 126

Query: 122 NEELQQCTYHVAIPANPEYSSLNLAQAVQIICYETR--VAHLAQTEAPQVEEEYPLSADL 179
           NE++ +    +++P NPE++SLNL Q V +  YE R  V  +A       + ++   AD+
Sbjct: 127 NEDIARANAIISVPVNPEFASLNLGQCVLLTAYEWRRQVTEVAPVVTDLGKSDWASHADV 186

Query: 180 ERFFVHLESTLSSTGFIIKNHPGQVM-TKLRRLFSRARIESQEMNILRGIL 229
           +    H E  L   GF         M T  R +FSR  +   ++ +L GI+
Sbjct: 187 DALVNHYEDRLDDAGFFFPPDKAPSMKTVFRNMFSRMPLTRADVQMLHGIM 237