Pairwise Alignments

Query, 641 a.a., lytic transglycosylase, catalytic (RefSeq) from Shewanella sp. ANA-3

Subject, 648 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

 Score =  351 bits (900), Expect = e-101
 Identities = 207/640 (32%), Positives = 336/640 (52%), Gaps = 6/640 (0%)

Query: 5   LTKMVLSSAIIIAGAFNASAAFALTSTQKTFLEAEKALKKQDYATYKPLRAKLGDYPLAI 64
           L  +++ + +   G+ +AS    L + +  + +A++ L +++ A Y+ +R ++  YPL  
Sbjct: 12  LVSILMFTTVWAVGSASAST-LDLEAQRAQYDKAQRWLDEKNVAQYQRIRKQIDSYPLTP 70

Query: 65  YLDHDIDIGKLNDLRGNDAKAMIDKYQTTPMYQRLRSKYLLNAGGQKRWNDFLSLAQDAP 124
           YLD+   +  L        +  ID ++  P   R+ + YL      K+W+  L      P
Sbjct: 71  YLDYRAFLIDLGSKPPIAVRNFIDSHKEYPFSARIAAPYLDALARSKKWSALLQFQTQLP 130

Query: 125 TDVRLQCYFYEAKLAKGETQTAYTAAQSLWVYGDSRPKECDPLFNAWTKAGKRTQDVIWA 184
                QC++Y AKL  G+   A+  A+ LW+ G S    CDPLF  W + G  + D +  
Sbjct: 131 NGETYQCHYYNAKLQTGKRNEAFEGAKKLWLNGASIADACDPLFAEWDRVGGLSDDWVLK 190

Query: 185 RMLLSFDEGQTSLLSYLSQKITVHSAEAKR--LVAVFKDPNSLRHTEKFKDKNPIVGDIV 242
           R LL+F+    +L+ YL +K+    ++AK   ++ +F  P  +    +   ++PI   + 
Sbjct: 191 RALLAFEGRNRNLIVYLQKKLDGKKSQAKAQGMLELFDKPERVLAYSRKASQDPINQKLA 250

Query: 243 AAGLKRLARKDLDQAINLYTRYQKAKRFTPAQDQQLQKYLVRRVLIEQDDNFKDWADNLL 302
              L++ AR +  +A  ++    KA+ +   Q  ++ +++  R++  ++     W D + 
Sbjct: 251 ELALQKWARSEPQEAQAVFNDVAKAQGWNQEQKGRVARFIAIRLMDTEEAAIAKWRDEVT 310

Query: 303 PEMKSDDMFERRLRWAIREQDSTHIARYLDLLSPESAAKERWQYWLYRTN-AKHAPESAT 361
              +   + E R+R A+RE D   +++++ +L  +     RWQYW  R+  A    +  T
Sbjct: 311 RTSQDVRLIEARIRLALRENDWRGLSQWIAVLPEQERKTLRWQYWQGRSEIALGKKKEGT 370

Query: 362 KALAAVSNERNFYGFAASQLLNKPVSLNQSPEPVVDGTSQKLEDDLGFVRVLELMALDRY 421
           + L A+  +R+FY  AA+++L +  S+N     V     Q         R+ EL+ALD+ 
Sbjct: 371 ERLKALLGQRSFYSVAAAKILQQ--SVNYPTSTVTLDMKQIKAHKKALARIDELIALDKV 428

Query: 422 FDARYEWVALLKRSNNEMRARYGRYAHDQGWYDFGVEASIQGKLWDDIPLRFPMAHQSGF 481
             A+ EW  LL R + + +     YA D GWY   + A+I   LWD+  LRFP+ HQ+ F
Sbjct: 429 PAAKSEWRWLLDRVSQKEKEMLAAYAADSGWYQMTIAATISASLWDNNQLRFPVVHQNLF 488

Query: 482 EHASKKHKVNIDEIRAISRRESAFFLYATSGVGARGLMQIMPATAKATAKKHGAKYSDPK 541
               +K+ V+   + +++R+ESA    A S VGARGLMQIMP TA+ TA+K+   YS+P 
Sbjct: 489 TLHGRKNGVDPITLMSLARQESALNPDAQSPVGARGLMQIMPDTARYTARKYQLSYSNPD 548

Query: 542 DLYSAELNLNLGSAYYAQLLKDFNQNRVLATAAYNAGPSRVRRWLAESNGKLDAMSFIES 601
           +LY    N+ +GS Y + LL+ ++QNR+LA AAYNAGPSRV  WL  S GKLDA  FIE+
Sbjct: 549 ELYQVGKNIEIGSRYLSSLLERYDQNRILAFAAYNAGPSRVDSWLKRSQGKLDAYGFIEA 608

Query: 602 IPFTETREYVQAVLSYRLIYEAQKQKPQPLFNEAELKFHY 641
           IPF ETR YVQ +L +   Y           NE EL   Y
Sbjct: 609 IPFAETRGYVQNILMFETYYRDLMGVQGRFLNEHELNTKY 648