Pairwise Alignments

Query, 321 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

Subject, 523 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N1B4

 Score = 58.5 bits (140), Expect = 3e-13
 Identities = 55/152 (36%), Positives = 74/152 (48%), Gaps = 20/152 (13%)

Query: 113 VGLLVLTCGLWLWRDEQTVVNRQLQTREQFH---REHQLT-------DGLTLLNDAKAFE 162
           V L+VL  GL+ W     V   Q++  E+     RE Q T       D LT L + + FE
Sbjct: 306 VALVVLGVGLFGW-----VFIHQVRAGERIEADLREAQKTLELIATHDSLTGLANRRLFE 360

Query: 163 HHLIKQLSQN--QSS--GLIMLDIDNFHQYNQNQGVEEGDRLLSQLALWLSSTL-RNQDL 217
             L  +  +   +SS   LIMLDID F +YN   G   GD  L+++A  L S   RN DL
Sbjct: 361 RALEIEFGRGARRSSPLSLIMLDIDYFKRYNDAYGHVAGDHCLAEVARALKSCCHRNADL 420

Query: 218 VCRYAGDRFIILLRGAIPALVSVMAEQIQQGV 249
             RY G+ F +LL          +AEQI++ V
Sbjct: 421 AVRYGGEEFAVLLPDTDIHGALTIAEQIRRSV 452