Pairwise Alignments

Query, 460 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella sp. ANA-3

Subject, 521 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score =  228 bits (582), Expect = 3e-64
 Identities = 161/502 (32%), Positives = 264/502 (52%), Gaps = 68/502 (13%)

Query: 5   TALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLL------LDPSQVLNN------FAST 52
           +ALSL+PP+V ++LAI+ RR +LSL +G + G LL      LD  Q L        +   
Sbjct: 9   SALSLLPPVVAILLAIFTRRVLLSLGVGILLGALLIADFSPLDMGQYLGQQVVGLFWDDG 68

Query: 53  SLKVMADETIGWLILVCGCFGALIALLVRTGGALAFGRNALKFAKGPKSSLFMTFILGIV 112
           +L       +G+LIL+    G + AL+  +G A AF   A +  +  + +  +T  LG V
Sbjct: 69  ALNSWNVYLLGFLILL----GMITALITVSGAAKAFADWARQHIRNKRDAKLLTMFLGCV 124

Query: 113 IFIDDYLNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLSTWAVF----FGG 168
           +FIDDY N+L VG   + +TD++ +SR  LAY++DSTAAP+CV+ P+S+W  +     GG
Sbjct: 125 VFIDDYFNSLVVGSVARPLTDRYYISRSKLAYLLDSTAAPICVISPVSSWGAYIIALIGG 184

Query: 169 LLVDNGVAAEGQGISVYMQAIPYMLYAWLAVAMVLLVV-LGVVPAIGPMKKAQLRAAQGE 227
           +L  +G    G  +SV++Q IP   YA  A+ ++L V  +G+   +GPM++ +L A +G 
Sbjct: 185 ILTAHGFTDSGH-LSVFIQMIPMNFYAIFALVLLLCVAFMGL--DVGPMRQHELNAQKGN 241

Query: 228 PAEAQVDLDQVQTSDEYAIAAIEEEFKHADNQGKLHNFLVPILLLVAFTVYFDI------ 281
             +    L     SD             AD+ GK+    +PI +LV  T+YF I      
Sbjct: 242 LYDEAKGLPPGANSD----------LPEADS-GKILGLFLPITVLVFATIYFMIGSGADA 290

Query: 282 -----------------DVWKGLLATLVITLPYYAVQRLMPLSEMMDQ------MIDGFK 318
                            DV   L    V+ L   A   ++ +S+ +D+      +I G +
Sbjct: 291 LAAENLPFSVIGAFEKTDVASSLFFGAVVGL---AATLVLVVSQGLDKALIFKGVIAGAR 347

Query: 319 SMLPAIGTVIAAFVFKDVCDALLLPQYVIESLSPFMTPKMLPAVVFLSMAILAFATGSSW 378
           SMLPAI  ++ A+    V   +   +Y+    +  +   +LPAV+F+   + AF+TG+SW
Sbjct: 348 SMLPAIYILLFAWTIAGVIGQMETGKYMASLATGNIPFALLPAVLFVLAGLTAFSTGTSW 407

Query: 379 GIFAVTIPIVMPLAQSVGADIPL-VIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSH 437
           G F + +PI   +A     ++ L ++ ++L+ + FG      SD+T+L++ G+ C+ + H
Sbjct: 408 GTFGIMLPIAADMAMGTHTNMMLPMLASVLAGAVFGDHCSPISDTTILSSTGANCHHIDH 467

Query: 438 AVTQLPYALIAAVIAFFGFILI 459
            +TQLPYALI A I+  G+ ++
Sbjct: 468 VLTQLPYALIVAGISLVGYTVL 489