Pairwise Alignments

Query, 283 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

Subject, 293 a.a., Predicted permease, DMT superfamily from Phaeobacter inhibens DSM 17395

 Score =  212 bits (540), Expect = 7e-60
 Identities = 127/279 (45%), Positives = 173/279 (62%), Gaps = 11/279 (3%)

Query: 5   RLFTLTTLTMFAFACNSILCRLALKDGSIDAGSFTLIRLLSGAIMLWLL------SLNKP 58
           RL  L +LTM AFA NSIL RLA+  G ++A SF L+RL SGA+ L  L      SL + 
Sbjct: 2   RLIVLVSLTMVAFAANSILGRLAIGGGYMEATSFGLLRLFSGAVTLITLCVFSGLSLRRD 61

Query: 59  ALEAKGHWGSALALFVYAAGFSYAYINMTASMGALLLFGAVQATMIGYGLYRKEIFNTRQ 118
             +A   WG+A AL +Y  GFS AY ++ A +GAL+LFG VQ +M  +G       +  Q
Sbjct: 62  LRQAL--WGAA-ALSIYIVGFSVAYQDLDAGLGALILFGVVQVSMFLWGACSGSPVSAGQ 118

Query: 119 WLGLACAAAGLIFLLLP--GLSAPPLMSSLLMISAGVAWGIYSIKGKGAKHPIPVSAGNF 176
             G   A AGL F++ P  G S  PL +SLLM   G+ W  YS+ G+GA+ P+  +A NF
Sbjct: 119 IGGAGIALAGLAFVVWPTDGASVAPLGASLLMALGGLGWAAYSLLGRGARAPLAATAVNF 178

Query: 177 IRTVPMALLLMLLVRDPLAVSQMGIIYALASGAIASGLGYAIWYSILPLLSSTYAATVQL 236
                M +  ++L    +  ++ G+  A+ SGA+ SGLGYA+WY +LP LS   AATVQL
Sbjct: 179 AVATLMMVPGVMLFGGDIVFTRAGVFLAVLSGAVTSGLGYALWYHVLPQLSPAVAATVQL 238

Query: 237 SVPLIAAVGGVLLLGEPLSLRLLLASCAILGGIALVVLS 275
           SVP+IA + G  LLGE +++ L++ S A+LGGIA+VVLS
Sbjct: 239 SVPVIAILAGAALLGEDIAVALVIGSAAVLGGIAVVVLS 277