Pairwise Alignments

Query, 303 a.a., putative DNA-binding transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

Subject, 302 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  317 bits (812), Expect = 2e-91
 Identities = 153/299 (51%), Positives = 212/299 (70%), Gaps = 1/299 (0%)

Query: 4   MLSEQALELIDIVARVGSFTAAANRLHKVPSAVSYAVKQIEEELGVVLFERHHRSVTLTP 63
           M S+ +LE++D VAR+GSFTAAA  LHKVPSA+SY+V+QIE ELGVVLF R  R V LTP
Sbjct: 2   MFSKSSLEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELTP 61

Query: 64  AGEHFVKQARNLLTQMDEMKRGTQRVANGWQPTLSIALDNIVRADRISVLIADFYRHFQD 123
           AGE F+ +AR LL QM+E++  T+R A+GW+ TL + LDN+V+ D++  ++  FY+ F  
Sbjct: 62  AGELFMLEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVVKLDKMKPMVEAFYQTFDF 121

Query: 124 IELIIRIEVFNGVWEALATGRSDIAIGATTAIPVGGVYQYKDMGDIQWAFLVSKNHPLAS 183
            EL I +EVFNG WEA+A GR+DI IGAT A+PVGG ++ +DMG + WAF++S NHP   
Sbjct: 122 AELQINMEVFNGSWEAIAQGRADIVIGATAAVPVGGDFEVRDMGILDWAFVMSPNHPCVR 181

Query: 184 IDRPLTDDELRPFPSICLEDTSREIPKRMTWLLENQRRLVVPDWIRAINCFREGLGIGYM 243
            ++ L++  +  F +ICL+DTS  +PKR T     QRRL++P+W  AI   + GLG+GYM
Sbjct: 182 -EQNLSEGFISQFLAICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSAIESLKSGLGVGYM 240

Query: 244 PVHLASVFIKAGALVEKQLENPKLTSPCCLAWNADKMSPALAWVLDYLGDTDKLHREWL 302
           P H+A   + +G LVEK L + KL S CCL W  D     + W+++YLG +D+L+ +WL
Sbjct: 241 PRHMAQPLLASGQLVEKVLPDEKLLSHCCLVWRKDDNHKLIEWMVNYLGSSDQLYSDWL 299