Pairwise Alignments

Query, 658 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella sp. ANA-3

Subject, 641 a.a., ATP-dependent DNA helicase, RecQ family from Pseudomonas stutzeri RCH2

 Score =  644 bits (1661), Expect = 0.0
 Identities = 345/638 (54%), Positives = 435/638 (68%), Gaps = 5/638 (0%)

Query: 18  LQQQFGFDGFRQGQHEVVSQLLSGHSSLAIFPTGSGKSLCYQFTALQLPHLTLVVSPLLA 77
           L Q FG+D FR GQ + +  +++G S  AIFPTGSGKSLCYQ  AL LPHLTLVVSPLLA
Sbjct: 6   LVQTFGYDRFRTGQEQAIRAVVAGRSVAAIFPTGSGKSLCYQLPALLLPHLTLVVSPLLA 65

Query: 78  LIKDQLSFLHEKGIKAASIDSTLTPELTQQVMRDARYGELKLLMVSVERFKNERFRQFIQ 137
           L++DQL+FLH  GI AASIDS  + E   + M  A+ GELK+LM+SVER KNERFR FI 
Sbjct: 66  LMQDQLAFLHRHGIAAASIDSAQSREQASETMARAKSGELKILMISVERLKNERFRNFIS 125

Query: 138 SIPISMLVVDEAHCISEWGHNFRPDYLKLPDYRRELAIPLVLLLTATATRKVKLDMAARF 197
            +PIS+LVVDEAHCISEWGHNFRPDYLKLPDY+R+  IP VLLLTATAT  V  DM  +F
Sbjct: 126 QVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQVLLLTATATPPVIADMQGKF 185

Query: 198 DIKPQHIVQTGFYRSNLDLTVLPVASQHKLTALQQQLNLFTGTG-IVYVTLQHTAEDVAA 256
            I    +V TGFYR NL+L V PV+  +K   L + L   +G   IVYVT Q TAE +A 
Sbjct: 186 AIAADDVVTTGFYRPNLNLLVEPVSGFNKQRRLVEWLGDKSGQPTIVYVTQQKTAEQIAE 245

Query: 257 KLCQMGFDASAYHAGFEDEKRQQIQQDFMQGKIRIVVATIAFGMGIDKSNIRFVVHYDLP 316
            L Q GF ASAYHAG   E R+ IQ+ FM G++  +VATIAFGMGIDK++IR VVHYDLP
Sbjct: 246 HLAQRGFPASAYHAGMAHELRESIQRRFMAGELNCIVATIAFGMGIDKADIRNVVHYDLP 305

Query: 317 KSIENYCQEIGRAGRDGLLSHCVTLANLDGINTVENFVYGDTPELASIAAVIDNIREETH 376
           KS+ENY QEIGRAGRDG  S C+ LAN D ++ ++NFVYGDTPE   I  V+D + +   
Sbjct: 306 KSVENYSQEIGRAGRDGQPSDCLVLANRDSLSVLQNFVYGDTPEREGIRCVLDELLQAGA 365

Query: 377 NGRWELQLHQLSNVSNIRQLPLKTLLVQLEMMGVIKPLYAYYADISYRF-IEPQAQILSQ 435
            G+WEL L+QLS+ SNIRQLPLKTLLVQLE+ G+I P +AY+A+  +++ +EP+A ++++
Sbjct: 366 GGQWELMLNQLSDQSNIRQLPLKTLLVQLELRGIIAPRFAYFAEYRFKYLLEPEA-LVAK 424

Query: 436 FSPERQAFLNDIFTHTQMKRVWGSLDFSALYQATGAERTRVLAALEYLASQQLIELEAKR 495
           F  ER+ F+  I   +   R W +LDF ALYQ  GA+R RV+ ALEY   +  IELE+K+
Sbjct: 425 FEGERRQFVEAIVHSSARARTWCTLDFDALYQQHGADRARVVKALEYFQEKGWIELESKQ 484

Query: 496 VTDVYQVNAEVLAQGHLADELHQYFTDKEAKEVARIAQLVRFFELTTCLNYNLARYFDDN 555
           +T+VY +         L+ ELH YF   EA E+ RI  ++  FE   CL+  LA YF D 
Sbjct: 485 MTEVYALLDTGFDAEALSAELHAYFKQHEASEITRIDNMLALFESAECLSQRLAAYFGDR 544

Query: 556 AAPQSCGHCSVCRGQLAKLAYSEVPKWPDDAQLKADLHEL-KRTAGSKGLASLSLDTQCR 614
            APQ CGHCSVCRGQ+A L         D   L     E  +R    KG A  S +   R
Sbjct: 545 QAPQHCGHCSVCRGQVAHLPEPPTLAPLDQTDLAGRCVEFSQRYMQLKGSAP-STECLTR 603

Query: 615 FMAGMTLPLFTRLQVRKLSGFGRCEHLRYAEIKAKLAQ 652
           F+ G+++P+FTRL+ R+L GF   E   YAE++A+L +
Sbjct: 604 FLCGISVPVFTRLKARQLPGFASLEAYPYAEVRARLTR 641