Pairwise Alignments

Query, 658 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella sp. ANA-3

Subject, 707 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas stutzeri RCH2

 Score =  242 bits (617), Expect = 5e-68
 Identities = 131/320 (40%), Positives = 191/320 (59%), Gaps = 5/320 (1%)

Query: 17  LLQQQFGFDGFRQGQHEVVSQLLSGHSSLAIFPTGSGKSLCYQFTALQLPHLTLVVSPLL 76
           +L+  FG+D FR  Q  ++ ++ SG  +L + PTG GKSLCYQ  AL    L +VVSPL+
Sbjct: 8   ILKDVFGYDAFRGNQGAIIERVGSGGDALVLMPTGGGKSLCYQVPALLRDGLAVVVSPLI 67

Query: 77  ALIKDQLSFLHEKGIKAASIDSTLTPELTQQVMRDARYGELKLLMVSVERFKNERFRQFI 136
           AL+ DQ++ L E G+ A +++STL+P+  + +    R  E+K+L ++ ER    R   F+
Sbjct: 68  ALMDDQVATLDELGVSAVALNSTLSPDEQRDIAERIRRNEIKMLYLAPERLVQPRMLAFL 127

Query: 137 QSIPISMLVVDEAHCISEWGHNFRPDYLKLPDYRRELAIPLVLLLTATATRKVKLDMAAR 196
           Q + I++  +DEAHC+S+WGH+FRP+Y++L            + LTATA  + + ++  R
Sbjct: 128 QRLEIALFAIDEAHCVSQWGHDFRPEYMQLGQLSELFPGVPRIALTATADMRTREEIVQR 187

Query: 197 FDIKPQHIVQTGFYRSNLDLTVLPVASQHK--LTALQQQLNLFTGTGIVYVTLQHTAEDV 254
             ++      + F R N+   ++P     K  L  L ++       GIVY   +   +D 
Sbjct: 188 LHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRG---DAGIVYCMSRKKVDDF 244

Query: 255 AAKLCQMGFDASAYHAGFEDEKRQQIQQDFMQGKIRIVVATIAFGMGIDKSNIRFVVHYD 314
           AA L + GF A  YHAG  +E R   Q+ F+  +  I+VATIAFGMGIDK N+RFV H D
Sbjct: 245 AAFLTEQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLD 304

Query: 315 LPKSIENYCQEIGRAGRDGL 334
           LPKS+E Y QE GRAGRDGL
Sbjct: 305 LPKSLEAYYQETGRAGRDGL 324



 Score = 30.0 bits (66), Expect = 4e-04
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 527 EVARIAQLVRFFELTTCLNYNLARYFDDNAAPQSCGHCSVC 567
           E  ++  ++   E T C    L  YFD+   P  CGHC  C
Sbjct: 357 EQHKLDAMLALCEETRCRRQALLAYFDEEL-PSPCGHCDNC 396