Pairwise Alignments

Query, 658 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella sp. ANA-3

Subject, 699 a.a., ATP-dependent DNA helicase RecQ from Phaeobacter inhibens DSM 17395

 Score =  256 bits (653), Expect = 3e-72
 Identities = 145/341 (42%), Positives = 208/341 (60%), Gaps = 3/341 (0%)

Query: 2   SYSISPSANATDYASLLQQQFGFDGFRQGQHEVVSQLLSGHSSLAIFPTGSGKSLCYQFT 61
           S + SP+ +ATD   LL++ FGFDGFR GQ E+V  + +G + LAI PTG GKSLC+Q  
Sbjct: 12  SGATSPAVSATDATPLLREIFGFDGFRPGQEEIVDAVTAGENVLAIMPTGGGKSLCFQLP 71

Query: 62  ALQLPHLTLVVSPLLALIKDQLSFLHEKGIKAASIDSTLTPELTQQVMRDARYGELKLLM 121
           AL    +T+V+SPL+AL++DQ+  L E G+ A ++ S  T E T+ + +    G LKLL 
Sbjct: 72  ALLREGVTVVISPLIALMRDQVRALQEVGVTAGALTSGNTDEETEALWQSIEEGRLKLLY 131

Query: 122 VSVERFKNERFRQFIQSIPISMLVVDEAHCISEWGHNFRPDYLKLPDYRRELAIPLVLLL 181
           ++ ER  +      ++ I +S++ VDEAHC+S+WGH+FRPDYL++ + RR L +PL    
Sbjct: 132 MAPERLASGAAMGMLRRIGVSLIAVDEAHCVSQWGHDFRPDYLRIGELRRALDVPLA-AF 190

Query: 182 TATATRKVKLDMAAR-FDIKPQHIVQTGFYRSNLDLTVLPVASQHKLTALQQQLNLFTGT 240
           TATA ++ + ++  + FD +       GF R N+ L      S  +   L+        +
Sbjct: 191 TATADQETREEIVEKLFDGEAPRSFLRGFDRPNIHLAFATKDSPRR-QILEFAAARKGQS 249

Query: 241 GIVYVTLQHTAEDVAAKLCQMGFDASAYHAGFEDEKRQQIQQDFMQGKIRIVVATIAFGM 300
           GIVY   +   E ++A L + G  A  YH G + E R+ ++  F +    IVVAT+AFGM
Sbjct: 250 GIVYCGTRAKTEALSAGLREAGHAACYYHGGMDAEDRRGVETRFAREDGLIVVATVAFGM 309

Query: 301 GIDKSNIRFVVHYDLPKSIENYCQEIGRAGRDGLLSHCVTL 341
           GIDK +IR+V H DLPKSIE Y QEIGR GRDG  +  +TL
Sbjct: 310 GIDKPDIRWVAHADLPKSIEAYYQEIGRGGRDGAPAETLTL 350



 Score = 30.4 bits (67), Expect = 3e-04
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 522 DKEAKEVARIAQLVRFFELTTCLNYNLARYFDDNAAPQSCGHCSVC 567
           ++   + AR+  L+   E   C    L  YF + A P  CG+C +C
Sbjct: 371 ERRGADHARLNALLGLAEALKCRRQTLLAYFGETAEP--CGNCDLC 414