Pairwise Alignments

Query, 562 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 663 a.a., DUF262 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 4e-17
 Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 14/245 (5%)

Query: 12  LSKIFSSDFDYEIPPYQRPYAWTTEQAGELFDDLYDFYSHEAEESYFLGSIV--LIKEEN 69
           L KI++ ++ + IP YQRPY W+ +    LF D+ +      E +YF+G+I+   I+++ 
Sbjct: 14  LEKIYTDNYQFSIPSYQRPYVWSDDDVLLLFRDIKE-ACRLKEPNYFIGTILSSRIEQDG 72

Query: 70  IPHAKVIDGQQRLTTLTILIAALTSLIDDKEARAECFAYIQEPGKKLQGIPAKPRL--AL 127
               ++IDGQQR TTL ++  A       K   A    Y    G+       KPRL  ++
Sbjct: 73  ERIYELIDGQQRTTTLMLMTIAF-KYAGIKSDLAGLAVYTSSDGED------KPRLQFSI 125

Query: 128 RQRDRTFFADTVQALNFTALAALDIATLENESQINIRQNALLLKEKLQSKFTEDELLIKF 187
           R++ +          N+   +   IA      Q+ +  + +L KE  + K  +       
Sbjct: 126 REQVQQLLGGLAGLKNYQVPSKETIADNAYLKQMGVALD-VLTKEVEKLKSDDGVSAEAM 184

Query: 188 GMFLMTRCFLVAVTSPSQQSAFRVFSVLNNRGLDLLPSDLIKAEAIGQISEAKRESFNDK 247
           G +L  +   V    P+Q    R+F+ +N  G+ L  +D++KA+    I   K + ++  
Sbjct: 185 GDYLYRQVQWVNNIVPTQMDLNRLFATMNTAGIQLEQADILKAKLFKHIHTDKAQ-YDAM 243

Query: 248 WEEIE 252
           W   E
Sbjct: 244 WVACE 248



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 47/212 (22%), Positives = 85/212 (40%), Gaps = 32/212 (15%)

Query: 318 YQATQNAGDINQLFYWLNRIDNSDWLPVAIHYLAKFGTDSDA---VLDFVSSLERLAAKL 374
           YQ+   + D     Y++NR        V +  +  F  +  A   +  F+S L R + K 
Sbjct: 417 YQSRSKSNDT----YYINRTQKELTDIVLLQSVRNFTGERSAQYWLTPFLSGLIRSSIKQ 472

Query: 375 HICAANINERIERYAQILAEIDAAVSPSIT------CINLTQNEQGEFLAAIDGNVYYLT 428
              A  + E I+    +  +     S ++       C +  Q++   F  ++  +  +  
Sbjct: 473 DSVALELLENIDNKMSLSVDTQKEASFALAEGIEPNCQSW-QSQSTYFAKSLGTSFEHYW 531

Query: 429 ARRRNYLILRT-----DSFLTDAAAKYDHSILT----IEHVLPQTVEAGSEWEVNWPDVD 479
            ++  YLI +       S  ++   K+    +T    +EHV PQ  E  S       D +
Sbjct: 532 FQKLEYLIWKKMKASESSLPSEELNKFKKYRITSKNSVEHVHPQNDEYNSRL-----DCE 586

Query: 480 IRDSWTHRLANLVPLTQRRNSSASNFDFERKK 511
             +S+     NLV L+   NSS SN D ++K+
Sbjct: 587 TLNSF----GNLVLLSPGENSSYSNQDVDKKR 614