Pairwise Alignments
Query, 878 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3
Subject, 539 a.a., mammalian cell entry protein from Burkholderia phytofirmans PsJN
Score = 181 bits (458), Expect = 1e-49
Identities = 111/324 (34%), Positives = 170/324 (52%), Gaps = 20/324 (6%)
Query: 4 IESPKVVKKKLFSP--IWLLPIVALALGAWLGIKSIKESGIEIQIHFPSATGIDVGKTLV 61
+ P +V ++ + P +W++P++A +G L ++++ E G I I F +A G++ GKT V
Sbjct: 13 LPDPDIVPRRGWLPSLVWVVPLIAALIGLALVVRAVTERGPAITIVFDNAEGLEPGKTQV 72
Query: 62 KYQGLTVGKVKDIGIDEDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDAL 121
KY+ + +G VK I + +D V + V + +A+ F K+T FW+V P+ GV G+ L
Sbjct: 73 KYKDVEIGSVKSITLSKDRTHVQIAVQLTRQAENFAVKDTRFWVVRPRVGAAGVSGIGTL 132
Query: 122 FSGNYIAIQPGKG-NAATFFEAERQPPPMQIGTEGVMIELTADKLGSLDVGSPVFFRQIP 180
SG YI + G+ T F PPP+ +G L D LGS+D+GSP+F+R++
Sbjct: 133 LSGAYIGVDVGRSTETRTEFVGLETPPPITAAQKGHRFTLHGDSLGSIDIGSPIFYRRVQ 192
Query: 181 VGSVVSYRLDGNAR-VIISAFIQEQYARLVKKNSHFWNVSGVKVDASLAGIKVNTESLAS 239
VG V LD + V + F+ Y + V NS +W+ SGV V G VNT+SLA+
Sbjct: 193 VGQVYGISLDKDGTGVTMQVFVAAPYDQYVGSNSRWWHASGVDVRLDSTGFVVNTQSLAA 252
Query: 240 ILAGGVSFSSDD----KAPAAQNGDSFALYDSETSAL---GGIEVSLTM---NDGNAIDK 289
IL GG++F + PAA+ D F L E A+ GI V M +
Sbjct: 253 ILVGGLAFQTPPGQPMGTPAAEKTD-FRLAADEVDAMRAPDGIRVRTVMVFSQSLRGLSV 311
Query: 290 GTRIVYRGITIGTLQSKQLTATGV 313
G + +RGI +G Q+T GV
Sbjct: 312 GATVDFRGIVLG-----QVTDIGV 330
Score = 112 bits (280), Expect = 6e-29
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 3/197 (1%)
Query: 649 KAAIRYQGHQVGEVTQVKLNTDLTTLTATAYLYGDYAEHFSRSDTEYHMVDAQISLAGIK 708
K ++Y+ ++G V + L+ D T + L AE+F+ DT + +V ++ AG+
Sbjct: 69 KTQVKYKDVEIGSVKSITLSKDRTHVQIAVQLTRQ-AENFAVKDTRFWVVRPRVGAAGVS 127
Query: 709 APETLITGPYIGVLPGKSNQKATHFQAKLVESSYANVAEDALKFTLEDSNLGSMKVGTPI 768
TL++G YIGV G+S + T F L A+ +FTL +LGS+ +G+PI
Sbjct: 128 GIGTLLSGAYIGVDVGRSTETRTEFVG-LETPPPITAAQKGHRFTLHGDSLGSIDIGSPI 186
Query: 769 FFRGIKVGQIDGYSLSSQGNSVLMQAHIEPQYSHLVNQSSQFWDASGIKVDVGIFSGAQI 828
F+R ++VGQ+ G SL G V MQ + Y V +S++W ASG+ V + +G +
Sbjct: 187 FYRRVQVGQVYGISLDKDGTGVTMQVFVAAPYDQYVGSNSRWWHASGVDVRLD-STGFVV 245
Query: 829 EAGSLETLLAGGINVAT 845
SL +L GG+ T
Sbjct: 246 NTQSLAAILVGGLAFQT 262
Score = 68.9 bits (167), Expect = 7e-16
Identities = 74/349 (21%), Positives = 153/349 (43%), Gaps = 23/349 (6%)
Query: 274 GIEVSLTMNDGNAIDKG-TRIVYRGITIGTLQSKQLTA--TGVTAVAKFEPEYANLLTSD 330
G +++ ++ ++ G T++ Y+ + IG+++S L+ T V + + N D
Sbjct: 52 GPAITIVFDNAEGLEPGKTQVKYKDVEIGSVKSITLSKDRTHVQIAVQLTRQAENFAVKD 111
Query: 331 GLFWLEGADISLSGIKNPERLLTGSVINFLPGTNANTALPSSFALQESAPDLLKAKKRQL 390
FW+ + +G+ LL+G+ I G + T + F E+ P + A+K
Sbjct: 112 TRFWVVRPRVGAAGVSGIGTLLSGAYIGVDVGRSTETR--TEFVGLETPPPITAAQKGHR 169
Query: 391 TITSTENMG-LTAGAEVRYKQLSIGEVLAVRLTKDLSAVEYQLELQPEFASLVRSDSYFI 449
+++G + G+ + Y+++ +G+V + L KD + V Q+ + + V S+S +
Sbjct: 170 FTLHGDSLGSIDIGSPIFYRRVQVGQVYGISLDKDGTGVTMQVFVAAPYDQYVGSNSRWW 229
Query: 450 PESALSIDASLDGVSVKTRDMATLTKG--AVSLIPGS-SDTPLAANTRLSLFSSIDEAKQ 506
S + + G V T+ +A + G A PG TP A T L + DE
Sbjct: 230 HASGVDVRLDSTGFVVNTQSLAAILVGGLAFQTPPGQPMGTPAAEKTDFRL--AADEVDA 287
Query: 507 FFA----RQQRLYFTLSSVDGADVSQGSPIYYKKMQIGSVE--SVNWQSKTEDFAIKIAI 560
A R + + S+ G +S G+ + ++ + +G V V + + F + + +
Sbjct: 288 MRAPDGIRVRTVMVFSQSLRG--LSVGATVDFRGIVLGQVTDIGVEYDPQARSFVMPVTL 345
Query: 561 DKQFQPLVQKPKVFWRNSAVDVSASLAGIDVAVAPLQGALKGSISLGLL 609
D L ++ R +A+ + + A ++ ++ L+G + G L
Sbjct: 346 DLYPDRLRRRS----RGAAMPEAGTAASHELLRRLVERGLRGQLRTGNL 390
Score = 63.2 bits (152), Expect = 4e-14
Identities = 70/315 (22%), Positives = 123/315 (39%), Gaps = 26/315 (8%)
Query: 390 LTITSTENMGLTAG-AEVRYKQLSIGEVLAVRLTKDLSAVEYQLELQPEFASLVRSDSYF 448
+TI GL G +V+YK + IG V ++ L+KD + V+ ++L + + D+ F
Sbjct: 55 ITIVFDNAEGLEPGKTQVKYKDVEIGSVKSITLSKDRTHVQIAVQLTRQAENFAVKDTRF 114
Query: 449 IPESALSIDASLDGVSVKTRDMATLTKGAVSLIPGSSDTPLAANTRLSLFSSIDEAKQFF 508
A + G+ TL GA + D + TR F ++
Sbjct: 115 WVVRPRVGAAGVSGIG-------TLLSGAYIGV----DVGRSTETRTE-FVGLETPPPIT 162
Query: 509 ARQQRLYFTLSSVDGADVSQGSPIYYKKMQIGSVESVNWQSKTEDFAIKIAIDKQFQPLV 568
A Q+ FTL + GSPI+Y+++Q+G V ++ +++ + + V
Sbjct: 163 AAQKGHRFTLHGDSLGSIDIGSPIFYRRVQVGQVYGISLDKDGTGVTMQVFVAAPYDQYV 222
Query: 569 QKPKVFWRNSAVDVSASLAGIDVAVAPLQGALKGSISL----GLLDSSTAEPNAALKLYE 624
+W S VDV G V L L G ++ G + A +L
Sbjct: 223 GSNSRWWHASGVDVRLDSTGFVVNTQSLAAILVGGLAFQTPPGQPMGTPAAEKTDFRLAA 282
Query: 625 SKQLALAQAQAIKLTL-----PASAKLAAKAAIRYQGHQVGEVTQVKLNTD----LTTLT 675
+ A+ I++ + L+ A + ++G +G+VT + + D +
Sbjct: 283 DEVDAMRAPDGIRVRTVMVFSQSLRGLSVGATVDFRGIVLGQVTDIGVEYDPQARSFVMP 342
Query: 676 ATAYLYGDYAEHFSR 690
T LY D SR
Sbjct: 343 VTLDLYPDRLRRRSR 357
Score = 48.1 bits (113), Expect = 1e-09
Identities = 60/284 (21%), Positives = 109/284 (38%), Gaps = 27/284 (9%)
Query: 532 IYYKKMQIGSVESVNWQSKTEDFAIKIAIDKQFQPLVQKPKVFWRNSAVDVSASLAGIDV 591
+ YK ++IGSV+S+ I + + +Q + K FW +A ++GI
Sbjct: 72 VKYKDVEIGSVKSITLSKDRTHVQIAVQLTRQAENFAVKDTRFWVVRPRVGAAGVSGI-- 129
Query: 592 AVAPLQGALKGSISLGLLDSSTAEPNAALKLYESKQLALAQAQAIKLTLPASA--KLAAK 649
G L +G+ + E E+ A + + TL + +
Sbjct: 130 ------GTLLSGAYIGVDVGRSTETRTEFVGLETPPPITAAQKGHRFTLHGDSLGSIDIG 183
Query: 650 AAIRYQGHQVGEVTQVKLNTDLTTLTATAYLYGDYAEHFSRSDTEYHM--VDAQISLAGI 707
+ I Y+ QVG+V + L+ D T +T ++ Y ++ + +H VD ++ G
Sbjct: 184 SPIFYRRVQVGQVYGISLDKDGTGVTMQVFVAAPYDQYVGSNSRWWHASGVDVRLDSTGF 243
Query: 708 KAPETLITGPYIGVLP---------GKSNQKATHFQAKLVESSYANVAEDALKFT---LE 755
+ +G L G + T F+ E A A D ++ +
Sbjct: 244 VVNTQSLAAILVGGLAFQTPPGQPMGTPAAEKTDFRLAADEVD-AMRAPDGIRVRTVMVF 302
Query: 756 DSNLGSMKVGTPIFFRGIKVGQID--GYSLSSQGNSVLMQAHIE 797
+L + VG + FRGI +GQ+ G Q S +M ++
Sbjct: 303 SQSLRGLSVGATVDFRGIVLGQVTDIGVEYDPQARSFVMPVTLD 346
Score = 29.6 bits (65), Expect = 5e-04
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 44 IQIHFPSATGIDVGKTLVKYQGLTVGKVKDIGIDED 79
+ + S G+ VG T V ++G+ +G+V DIG++ D
Sbjct: 299 VMVFSQSLRGLSVGAT-VDFRGIVLGQVTDIGVEYD 333