Pairwise Alignments
Query, 878 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3
Subject, 552 a.a., mammalian cell entry protein from Burkholderia phytofirmans PsJN
Score = 183 bits (464), Expect = 3e-50
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 18/324 (5%)
Query: 3 QIESPKVVKKKLFSP--IWLLPIVALALGAWLGIKSIKESGIEIQIHFPSATGIDVGKTL 60
Q+ P++ + + P +W++P++A +G L IKS+ G I I F SA G++ GKT
Sbjct: 26 QLPDPEIEPRSRWLPSLVWMIPLIAALIGIALVIKSVTARGPTITISFVSAEGLEPGKTK 85
Query: 61 VKYQGLTVGKVKDIGIDEDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDA 120
VKY+ + VG VK I + +DL V V+V + + F K++ FW+V P+ +GV GL
Sbjct: 86 VKYKDVDVGSVKTITLSKDLSHVLVQVQLTKEGEDFAVKDSRFWVVRPRVGASGVSGLTT 145
Query: 121 LFSGNYIAIQPGKG-NAATFFEAERQPPPMQIGTEGVMIELTADKLGSLDVGSPVFFRQI 179
L SG YI G + F PPP+ +G L D LGS+D+GSP+F+R++
Sbjct: 146 LLSGAYIGADAGHSPDTEKNFVGLETPPPITGDQKGHQFVLHGDSLGSIDIGSPIFYRRV 205
Query: 180 PVGSVVSYRLDGNAR-VIISAFIQEQYARLVKKNSHFWNVSGVKVDASLAGIKVNTESLA 238
VG VV + LD + V + F+ + + V NS +W+ SGV + +G K+NT+SLA
Sbjct: 206 QVGQVVGFSLDKDGTGVTMQVFVSAPFDQYVGTNSRWWHASGVDLRLDSSGFKLNTQSLA 265
Query: 239 SILAGGVSFSS---DDKAPAAQNGDSFALYDSETSAL---GGIEVSLTMNDGNA---IDK 289
+++ GG+SF S A N +F L E A+ G+ + + MN + +
Sbjct: 266 TVIVGGLSFQSPPGQGVGAQAPNNMTFRLGSDEADAMREPDGVPLRVVMNFNQSLRGLSI 325
Query: 290 GTRIVYRGITIGTLQSKQLTATGV 313
G + +RGI +G Q+T G+
Sbjct: 326 GAPVDFRGIVLG-----QVTNIGI 344
Score = 98.6 bits (244), Expect = 9e-25
Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 649 KAAIRYQGHQVGEVTQVKLNTDLTTLTATAYLYGDYAEHFSRSDTEYHMVDAQISLAGIK 708
K ++Y+ VG V + L+ DL+ + L + E F+ D+ + +V ++ +G+
Sbjct: 83 KTKVKYKDVDVGSVKTITLSKDLSHVLVQVQLTKE-GEDFAVKDSRFWVVRPRVGASGVS 141
Query: 709 APETLITGPYIGVLPGKSNQKATHFQAKLVESSYANVAEDALKFTLEDSNLGSMKVGTPI 768
TL++G YIG G S +F L + +F L +LGS+ +G+PI
Sbjct: 142 GLTTLLSGAYIGADAGHSPDTEKNFVG-LETPPPITGDQKGHQFVLHGDSLGSIDIGSPI 200
Query: 769 FFRGIKVGQIDGYSLSSQGNSVLMQAHIEPQYSHLVNQSSQFWDASGIKVDVGIFSGAQI 828
F+R ++VGQ+ G+SL G V MQ + + V +S++W ASG+ + + SG ++
Sbjct: 201 FYRRVQVGQVVGFSLDKDGTGVTMQVFVSAPFDQYVGTNSRWWHASGVDLRLD-SSGFKL 259
Query: 829 EAGSLETLLAGGIN 842
SL T++ GG++
Sbjct: 260 NTQSLATVIVGGLS 273
Score = 68.9 bits (167), Expect = 8e-16
Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 32/316 (10%)
Query: 385 AKKRQLTITSTENMGLTAG-AEVRYKQLSIGEVLAVRLTKDLSAVEYQLELQPEFASLVR 443
A+ +TI+ GL G +V+YK + +G V + L+KDLS V Q++L E
Sbjct: 64 ARGPTITISFVSAEGLEPGKTKVKYKDVDVGSVKTITLSKDLSHVLVQVQLTKEGEDFAV 123
Query: 444 SDSYFIPESALSIDASLDGVSVKTRDMATLTKGAVSLIPGS---SDTPLAANTRLSLFSS 500
DS F V+ R A+ G +L+ G+ +D + +T + F
Sbjct: 124 KDSRFWV--------------VRPRVGASGVSGLTTLLSGAYIGADAGHSPDTEKN-FVG 168
Query: 501 IDEAKQFFARQQRLYFTLSSVDGADVSQGSPIYYKKMQIGSVESVNWQSKTEDFAIKIAI 560
++ Q+ F L + GSPI+Y+++Q+G V + +++ +
Sbjct: 169 LETPPPITGDQKGHQFVLHGDSLGSIDIGSPIFYRRVQVGQVVGFSLDKDGTGVTMQVFV 228
Query: 561 DKQFQPLVQKPKVFWRNSAVDVSASLAGIDVAVAPLQGALKGSISL----GLLDSSTAEP 616
F V +W S VD+ +G + L + G +S G + A
Sbjct: 229 SAPFDQYVGTNSRWWHASGVDLRLDSSGFKLNTQSLATVIVGGLSFQSPPGQGVGAQAPN 288
Query: 617 NAALKLYESKQLALAQAQAIKLTLPASAK-----LAAKAAIRYQGHQVGEVTQVKLNTD- 670
N +L + A+ + + L + + L+ A + ++G +G+VT + ++ D
Sbjct: 289 NMTFRLGSDEADAMREPDGVPLRVVMNFNQSLRGLSIGAPVDFRGIVLGQVTNIGIDYDP 348
Query: 671 ---LTTLTATAYLYGD 683
T+ T LY D
Sbjct: 349 KTRSFTMPVTMNLYPD 364
Score = 67.4 bits (163), Expect = 2e-15
Identities = 77/379 (20%), Positives = 168/379 (44%), Gaps = 22/379 (5%)
Query: 274 GIEVSLTMNDGNAIDKG-TRIVYRGITIGTLQSKQLTA--TGVTAVAKFEPEYANLLTSD 330
G ++++ ++ G T++ Y+ + +G++++ L+ + V + E + D
Sbjct: 66 GPTITISFVSAEGLEPGKTKVKYKDVDVGSVKTITLSKDLSHVLVQVQLTKEGEDFAVKD 125
Query: 331 GLFWLEGADISLSGIKNPERLLTGSVINFLPGTNANTALPSSFALQESAPDLLKAKKRQL 390
FW+ + SG+ LL+G+ I G + +T +F E+ P + +K
Sbjct: 126 SRFWVVRPRVGASGVSGLTTLLSGAYIGADAGHSPDT--EKNFVGLETPPPITGDQKGHQ 183
Query: 391 TITSTENMG-LTAGAEVRYKQLSIGEVLAVRLTKDLSAVEYQLELQPEFASLVRSDSYFI 449
+ +++G + G+ + Y+++ +G+V+ L KD + V Q+ + F V ++S +
Sbjct: 184 FVLHGDSLGSIDIGSPIFYRRVQVGQVVGFSLDKDGTGVTMQVFVSAPFDQYVGTNSRWW 243
Query: 450 PESALSIDASLDGVSVKTRDMATLTKGAVSL--IPGSSDTPLAANTRLSLFSS--IDEAK 505
S + + G + T+ +AT+ G +S PG A N S D +
Sbjct: 244 HASGVDLRLDSSGFKLNTQSLATVIVGGLSFQSPPGQGVGAQAPNNMTFRLGSDEADAMR 303
Query: 506 QFFARQQRLYFTLS-SVDGADVSQGSPIYYKKMQIGSVES--VNWQSKTEDFAIKIAIDK 562
+ R+ + S+ G +S G+P+ ++ + +G V + +++ KT F + + ++
Sbjct: 304 EPDGVPLRVVMNFNQSLRG--LSIGAPVDFRGIVLGQVTNIGIDYDPKTRSFTMPVTMNL 361
Query: 563 QFQPLVQKPKVFWRNSAVDVSASLAGIDVAVAPLQGALKGSISLGLLDSSTAEPNAALKL 622
L ++ +R +A SLAG + ++ L+G + G L T++ A+ +
Sbjct: 362 YPDRLGRR----FRETA-PAPGSLAGQTMLQQLVKHGLRGQLRTGNL--ITSQLYVAVDI 414
Query: 623 YESKQLALAQAQAIKLTLP 641
+ A + L LP
Sbjct: 415 FPKAPPATVDVASDPLELP 433
Score = 43.5 bits (101), Expect = 3e-08
Identities = 56/287 (19%), Positives = 111/287 (38%), Gaps = 20/287 (6%)
Query: 505 KQFFARQQRLYFTLSSVDGADVSQGSPIYYKKMQIGSVESVNWQSKTEDFAIKIAIDKQF 564
K AR + + S +G + + + + YK + +GSV+++ +++ + K+
Sbjct: 60 KSVTARGPTITISFVSAEGLEPGK-TKVKYKDVDVGSVKTITLSKDLSHVLVQVQLTKEG 118
Query: 565 QPLVQKPKVFWRNSAVDVSASLAGIDVAVAPLQGALKGSISLGLLDSSTAEPNAALKLYE 624
+ K FW V +G+ L GA G+ + S E N
Sbjct: 119 EDFAVKDSRFW---VVRPRVGASGVSGLTTLLSGAYIGADAG---HSPDTEKNFVGLETP 172
Query: 625 SKQLALAQAQAIKLTLPASAKLAAKAAIRYQGHQVGEVTQVKLNTDLTTLTATAYLYGDY 684
+ L + + + I Y+ QVG+V L+ D T +T ++ +
Sbjct: 173 PPITGDQKGHQFVLHGDSLGSIDIGSPIFYRRVQVGQVVGFSLDKDGTGVTMQVFVSAPF 232
Query: 685 AEHFSRSDTEYHM--VDAQISLAGIKAPETLITGPYIGVL-----PGKS-NQKATHFQAK 736
++ + +H VD ++ +G K + +G L PG+ +A +
Sbjct: 233 DQYVGTNSRWWHASGVDLRLDSSGFKLNTQSLATVIVGGLSFQSPPGQGVGAQAPNNMTF 292
Query: 737 LVESSYANVAEDALKFTLE-----DSNLGSMKVGTPIFFRGIKVGQI 778
+ S A+ + L + +L + +G P+ FRGI +GQ+
Sbjct: 293 RLGSDEADAMREPDGVPLRVVMNFNQSLRGLSIGAPVDFRGIVLGQV 339
Score = 26.9 bits (58), Expect = 0.003
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 50 SATGIDVGKTLVKYQGLTVGKVKDIGIDEDLK 81
S G+ +G V ++G+ +G+V +IGID D K
Sbjct: 319 SLRGLSIGAP-VDFRGIVLGQVTNIGIDYDPK 349